Construct: ORF ccsbBroadEn_12611

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011215.1_s300c1, BRDN0000390628
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTLL7 (79739)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79739 TTLL7 tubulin tyrosine ligase like 7 XM_017002349.2 74.1% 73.9% (many diffs)
2 human 79739 TTLL7 tubulin tyrosine ligase like 7 XM_024449807.1 74.1% 73.9% (many diffs)
3 human 79739 TTLL7 tubulin tyrosine ligase like 7 NM_001350215.2 55.3% 55.2% (many diffs)
4 human 79739 TTLL7 tubulin tyrosine ligase like 7 NM_001350214.2 53.6% 53.5% (many diffs)
5 human 79739 TTLL7 tubulin tyrosine ligase like 7 NM_024686.6 53.6% 53.5% (many diffs)
6 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737415.2 27.5% (many diffs)
7 human 79739 TTLL7 tubulin tyrosine ligase like 7 XM_011542159.3 27.4% 27% (many diffs)
8 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737411.2 18% (many diffs)
9 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_946760.3 17.9% (many diffs)
10 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737413.2 17.8% (many diffs)
11 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737409.2 17.8% 1_1237del;2669_8005del
12 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737412.2 17.8% 1_1237del;1788_1789insGAAG;2665_8001del
13 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_946758.3 17.8% (many diffs)
14 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737414.2 17.7% (many diffs)
15 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737410.2 17.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1497
ORF length:
1431
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTG TAGACCTGGT CAACCTCCAG GAAGCGAAAG TGTCTGCTTT GAAGTCCTGG
121GATTTGATAT TTTGTTGGAT AGAAAACTAA AGCCATGGCT TCTGGAGATT AACCGAGCCC
181CAAGCTTTGG AACTGATCAG AAAATAGACT ATGATGTAAA AAGGGGAGTG CTGCTAAATG
241CGTTGAAGCT ACTAAACATA AGGACCAGTG ACAAAAGAAG AAACTTGGCC AAACAAAAAG
301CTGAGGCTCA AAGGAGGCTC TATGGTCAAA ATTCAATTAA AAGGCTCTTA CCAGGCTCCT
361CAGACTGGGA ACAGCAGAGA CACCAGTTGG AGAGGCGGAA AGAAGAGTTG AAAGAGAGAC
421TCGCTCAAGT ACGAAAGCAG ATCTCACGAG AAGAACATGA AAATCGACAT ATGGGGAATT
481ATAGACGAAT TTATCCTCCT GAAGATAAAG CATTACTTGA AAAGTATGAA AATTTGTTAG
541CTGTTGCCTT TCAGACCTTC CTTTCAGGAA GAGCAGCTTC ATTCCAGCGA GAGTTGAATA
601ATCCTTTGAA AAGGATGAAG GAAGAAGATA TTTTGGATCT TCTGGAGCAA TGTGAAATTG
661ATGATGAAAA GTTGATGGGA AAAACTACCA AGACTCGAGG ACCAAAGCCT CTGTGTTCTA
721TGCCTGAGAG TACTGAGATA ATGAAAAGAC CAAAGTACTG CAGCAGTGAC AGCAGTTATG
781ATAGTAGCAG CAGCTCTTCA GAATCTGACG AAAATGAAAA AGAAGAGTAC CAAAATAAGA
841AAAGAGAAAA GCAAGTTACA TATAATCTTA AACCCTCCAA CCACTACAAA TTAATTCAAC
901AACCCAGCTC CATAAGACGT TCAGTCAGCT GCCCTCGGTC CATCTCTGCT CAATCACCTT
961CCAGTGGGGA CACCCGCCCA TTTTCTGCTC AACAAATGAT ATCTGTGTCA CGGCCAACTT
1021CTGCATCTCG GTCACATTCC TTAAACCGTG CTTCCTCCTA CATGAGGCAT CTGCCTCACA
1081GTAATGATGC CTGCTCTACC AACTCTCAAG TGAGTGAGTC TTTGCGGCAA CTGAAAACAA
1141AAGAACAAGA AGATGATCTA ACAAGTCAGA CCTTATTTGT TCTCAAAGAC ATGAAGATCC
1201GGTTTCCAGG AAAGTCAGAT GCAGAATCAG AACTTCTGAT AGAAGATATC ATTGATAACT
1261GGAAGTATCA TAAAACCAAA GTGGCTTCAT ATTGGCTCAT AAAATTGGAC TCTGTAAAAC
1321AACGAAAAGT TTTGGACATA GTGAAAACAA GTATTCGTAC AGTTCTTCCA CGCATCTGGA
1381AGGTGCCTGA TGTTGAAGAA GTAAATTTAT ATCGGATTTT CAACCGGGTT TTTAATCGCT
1441TACTCTGGAG TCGTGGCCAA GGGCTGTGGA ACTGTTTCTG TGATTCAGGT TACGTGTACC
1501CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1561aac

Download FASTA (ORF) (Full)