Construct: ORF ccsbBroadEn_12617

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010758.1_s300c1, BRDN0000392891
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL36 (79786)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79786 KLHL36 kelch like family member 36 NM_001303451.2 99.9% 100% 631C>T
2 human 79786 KLHL36 kelch like family member 36 NM_024731.4 89.7% 89.7% 631C>T;1105_1293del
3 human 79786 KLHL36 kelch like family member 36 XM_005256149.2 89.7% 89.7% 631C>T;1105_1293del
4 human 79786 KLHL36 kelch like family member 36 XR_001751986.2 22% (many diffs)
5 human 79786 KLHL36 kelch like family member 36 XR_933433.3 17.9% (many diffs)
6 mouse 234796 Klhl36 kelch-like 36 NM_146219.1 76.7% 76.1% (many diffs)
7 mouse 234796 Klhl36 kelch-like 36 XR_001778433.1 50.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1725
ORF length:
1659
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAATAAG
61TTGGCATGAT GGAGGGAAGC AGGCAGACGC GAGTGTCTCG GCCATACAAG ATCAGCGAAT
121CATCAAAGGT ATACCGCTGG GCCGACCACT CAAGCACGGT GCTGCAGCGG CTGAACGAGC
181AGCGTCTCCG CGGGCTCTTC TGCGACGTCG TCCTGGTGGC CGATGAGCAG CGTGTGCCAG
241CCCATCGCAA CCTGCTGGCC GTGTGCAGCG ACTACTTCAA CTCCATGTTC ACCATCGGCA
301TGCGGGAAGC TTTCCAGAAG GAGGTGGAGC TGATCGGCGC CTCCTACATT GGGCTCAAGG
361CCGTGGTGGA CTTCCTGTAC GGCGGGGAGC TGGTGCTGGA TGGCGGCAAC ATTGACTACG
421TCCTGGAGAC GGCTCACCTG CTGCAGATCT GGACGGTGGT AGACTTCTGC TGTGAGTACC
481TGGAGCAGGA GGTGAGCGAG GACAACTACC TGTACCTGCA GGAGCTGGCC TCCATCTACA
541GCCTCAAGCG GCTTGATGCC TTCATCGATG GCTTCATCCT GAACCACTTC GGCACGCTGT
601CCTTTACGCC CGACTTCCTG CAGAACGTCT CCATGCAGAA GCTGTGTGTC TACCTGAGCA
661GCAGCGAGGT GCAGCGGGAG TGTGAGCACG ACCTCTTGCA GGCCGCCCTG CAGTGGCTGA
721CGCAGCAGCC CGAGCGCGAG GCCCACGCCC GCCAGGTGCT GGAGAACATC CACTTCCCGC
781TCATCCCCAA GAACGACCTG CTGCACCGCG TCAAGCCGGC CGTGTGCTCG CTGCTGCCCA
841AGGAGGCCAA CTGCGAGGGC TTCATCGAGG AGGCCGTGCG CTACCACAAC AACCTGGCGG
901CCCAGCCCGT CATGCAGACC AAGCGCACGG CGCTGCGCAC CAACCAGGAG CGCCTGCTGT
961TTGTGGGCGG CGAGGTCTCC GAGCGGTGTC TGGAGCTCAG TGACGACACC TGCTACCTGG
1021ACGCCAAGAG CGAGCAGTGG GTCAAAGAGA CGCCGCTGCC CGCCCGGCGG AGCCACCACT
1081GTGTCGCGGT GCTGGGGGGC TTCATCTTCA TCGCCGGCGG CAGCTTCTCA CGGGACAACG
1141GAGGGGATGC GGCCTCCAAT CTTCTTTATA GGTTCACGTA CGGCCACGCG GGCACCATCT
1201ACAAAGACTT CGTGTACATC TCGGGGGGCC ACGACTACCA AATTGGCCCC TACCGCAAGA
1261ACCTGCTATG CTACGACCAC CGGACAGACG TGTGGGAGGA GCGGCGGCCC ATGACCACGG
1321CGCGCGGCTG GCACAGCATG TGCAGCCTGG GTGACAGCAT CTACTCCATC GGGGGCAGCG
1381ATGACAACAT CGAGTCCATG GAGCGCTTCG ACGTGCTGGG CGTGGAGGCC TACAGCCCGC
1441AGTGCAACCA GTGGACCCGC GTGGCGCCGC TGCTGCACGC CAACAGCGAG TCGGGCGTGG
1501CAGTGTGGGA GGGCCGCATC TACATCCTGG GCGGCTACAG CTGGGAGAAC ACTGCCTTCT
1561CCAAGACCGT GCAGGTGTAC GACCGCGAGG CCGACAAGTG GAGCAGGGGC GTCGACCTGC
1621CCAAGGCCAT CGCTGGCGGG TCCGCCTGTG TCTGCGCCCT GGAGCCACGG CCAGAGGACA
1681AGAAGAAGAA AGGCAAAGGC AAGAGGCACC AGGACCGGGG CCAGTGCCCA ACTTTCTTGT
1741ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)