Construct: ORF ccsbBroadEn_13131

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016036.1_s300c1, BRDN0000394697
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAH14 (127602)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 127602 DNAH14 dynein axonemal heavy chain 14 NM_001145154.3 96.6% 96.6% 1_45del
2 human 127602 DNAH14 dynein axonemal heavy chain 14 NM_001349911.2 91.6% 91.6% 1_45del;580_581ins69
3 human 127602 DNAH14 dynein axonemal heavy chain 14 NM_001367481.1 56.4% 52.4% (many diffs)
4 human 127602 DNAH14 dynein axonemal heavy chain 14 NM_144989.3 46.6% 45.1% (many diffs)
5 human 127602 DNAH14 dynein axonemal heavy chain 14 NM_001349912.2 42% 42.1% 1_45del;215_216ins150;618_618delGins592
6 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_017000298.1 11.2% 11.2% 1_45del;1359_11664delinsG
7 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544072.2 9.8% 8.9% (many diffs)
8 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544070.2 9.7% 9.7% 1_45del;1359_13473delinsG
9 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544069.2 9.7% 9.7% 1_45del;1359_13497delinsG
10 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544067.2 9.6% 9.6% 1_45del;1359_13623delinsG
11 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544066.2 9.6% 9.6% 1_45del;1359_13635delinsG
12 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544065.2 9.6% 9.6% 1_45del;1359_13659delinsG
13 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544064.2 9.5% 9.6% 1_45del;1359_13683delinsG
14 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544063.2 9.5% 9.5% 1_45del;1359_13692delinsG
15 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544062.2 9.5% 9.5% 1_45del;1359_13695delinsG
16 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_017000297.1 9.5% 9.5% 1_45del;1359_13734delinsG
17 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544061.2 9.5% 9.5% 1_45del;1359_13746delinsG
18 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_017000296.1 9.5% 9.5% 1_45del;1359_13752delinsG
19 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_006711735.3 9.5% 9.5% 1_45del;1359_13758delinsG
20 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_017000295.1 9.5% 9.5% 1_45del;1359_13776delinsG
21 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544059.2 9.5% 9.5% 1_45del;1359_13803delinsG
22 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544058.2 9.4% 9.4% 1_45del;1359_13848delinsG
23 human 127602 DNAH14 dynein axonemal heavy chain 14 NM_001367479.1 9.4% 9.4% 1_45del;1359_13851delinsG
24 human 127602 DNAH14 dynein axonemal heavy chain 14 XM_011544071.2 8.6% 6.6% (many diffs)
25 human 127602 DNAH14 dynein axonemal heavy chain 14 XR_001736974.1 8.5% 1_1491del;2805_15345delinsG
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1383
ORF length:
1314
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGACAAGGAG GAAACCAAGA CAAAACCAAG ACTTTTAAGA TATGAAGAGA
121AAAAATATGA AGATGTGAAA CCATTAGAGA CTCAACCAGC TGAAATAGCA GAAAAGGAAA
181CATTGGAATA TAAAACAGTT AGAACATTCT CTGAATCTTT GAAGTCAGAG AAAACAGAAG
241ATTACCTTAG AGAAAGTATA ATTCAACAAC ATATGGTTTC TCCAGAGCCA GCTTCCCTTA
301AGGAGAAAGG GAAGTCAAGG AGAAAAAAGG ATCAAACTCA TGCTTGTCCA AATGTTAGGA
361AAGCCAGGCC TGTGTCCTAT GATAGAACAG AACCAAAAGA TGATGATGTG ATAAGAAATA
421TTATTAGGCT ACGAGAAAAG CTTGGTTGGC AAACTATATT ACCGCAGCAC AGTTTGAAAT
481ACGGAAGCTC CAAAATTGCA ATTCAGAAGA TTACTTTAAA GAAACCTTTG GAAGATGATG
541GAGAATTTGT TTATTGCCTT CCTCGGAAAA GTCCTAAATC CCTTTACAAT CCATATGATC
601TTCAGGTAGT ATCGGCTCAT ACTGCTAAAC ATTGCAAAGA ATTTTGGGTT ATTACTGCTT
661CATTTATCTC AAAGGTTATT AATATAGTTG GTAGTGTAAA GGAAGTAGAA CTCATACCTA
721CTTTGGAATG GCTATCAGAA AGAAGACATT ACTATTTATT ACGGCAATTC AAGATATTTT
781CTGATTTCCG AATGAATAAA GCATTTGTTA CCTGGAAATT GAATGTTAAA AGAATTAAGA
841CAGAGAAGAG CAGGTCATTT TTGTACCACC ATCTTTTTTT GGCTGATGAC TTGTTTCAAA
901CCTGTTTGGT TTATATAAGA GGACTTTGTG AAGATGCAAT TAATCTCAAA AATTATAATG
961ACCATGAAAA TAATCTATCT GCCATATGCC TTGTAAAGCT GGATAGTTCT CGAACATATT
1021CTCTAGATGA ATTTTGTGAA GAGCAGTTAC AGCAAGCTAC CCAGGCATTG AAACAACTTG
1081AGGACATCAG GAATAAAGCA ATTTCAGAGA TGAAAAGTAC TTTTCTAAAG GTTGCAGAAA
1141AGAATGAAAT CAAAGAGTAT TTTGAGTCAA AACTCTCTGA AGATGACACA ACACATTTCA
1201AGCTGCCTAA ATATAGACGT TTATTAGAAA CATTTTTCAA GTTTGTAATG CTGGTTGACT
1261ACATATTTCA GGAACTCATT CGTCAACTTA TGAACACTGC AGTCACACTA CTTTTGGAAT
1321TATTTAATGG TTCTGCTGGA ATGCCATTTT CAGTGGAAAA AAAGAATGAA AATCTTATCA
1381GGTTGCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1441gcaacgaac

Download FASTA (ORF) (Full)