Construct: ORF ccsbBroadEn_13449

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001410.1_s300c1, BRDN0000395325
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RICTOR (253260)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 253260 RICTOR RPTOR independent companion... XM_006714463.3 15.7% 15% (many diffs)
2 human 253260 RICTOR RPTOR independent companion... XM_011514005.2 15.4% 14.8% (many diffs)
3 human 253260 RICTOR RPTOR independent companion... NM_152756.5 15.3% 14.7% (many diffs)
4 human 253260 RICTOR RPTOR independent companion... NM_001285439.2 15.1% 14.5% (many diffs)
5 human 253260 RICTOR RPTOR independent companion... XM_017009312.1 14.4% 13.7% (many diffs)
6 human 253260 RICTOR RPTOR independent companion... XM_017009311.1 14.2% 13.6% (many diffs)
7 human 253260 RICTOR RPTOR independent companion... XM_017009313.1 12% 11.4% (many diffs)
8 human 253260 RICTOR RPTOR independent companion... XM_011514006.3 11.4% 10.7% (many diffs)
9 mouse 78757 Rictor RPTOR independent companion... XM_006520004.3 18.7% 19.3% (many diffs)
10 mouse 78757 Rictor RPTOR independent companion... NM_030168.3 14% 14.4% (many diffs)
11 mouse 78757 Rictor RPTOR independent companion... XM_006520003.1 13.8% 14.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
861
ORF length:
795
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGCGATCGGC CGCGGCCGCT CTCTGAAGAA CCTCCGAGTA CGAGGGCGGA
121ATGACAGCGG CGAGGAGAAC GTCCCGCTGG ATCTGACCCG AGAACCTTCT GATAACTTAA
181GAGAGATTCT CCAAAATGTG GCCAGATTGC AGGGAGTATC AAATATGAGA AAGCTAGGCC
241ATCTGAATAA CTTTACTAAG CTTCTTTGTG ATATTGGCCA CAGTGAAGAA AAACTGGGCT
301TTCACTATGA GGATATCATA ATTTGTTTGC GGTTAGCTTT ATTAAATGAA GCAAAAGAAG
361TGCGAGCAGC AGGGCTACGA GCGCTTCGAT ATCTCATCCA AGACTCCAGT ATTCTCCAGA
421AGGTGCTAAA ATTGAAAGTG GACTATTTAA TAGCTAGGTG CATTGACATA CAACAGAGCA
481ACGAGGTAGA GAGGACACAA GCACTTCGAT TAGTCAGAAA GATGATTACT GTGAATGCTT
541CCTTGTTTCC TAGTTCTGTG ACCAACTCAT TAATTGCAGT TGGAAATGAT GGACTTCAAG
601AAAGAGACAG AATGGTCCGA GCATGCATTG CCATTATCTG TGAACTAGCA CTTCAGAATC
661CAGAGGTGGT GGCCCTTCGA GGTGGACTAA ACACCATCTT GAAAAATGTG ATCGATTGCC
721AATTAAGTCG AATAAATGAG GCCCTAATTA CTACAATTTT GCACCTTCTT AATCATCCAA
781AGACTCGACA GTATGTGCGA GCTGATGTAG AATTAGAGGT AGGAACTTTA ATATTCTTTT
841CTAGTTTTAA AATATTATTA TACCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
901attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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