Construct: ORF ccsbBroadEn_13626

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006341.1_s300c1, BRDN0000397571
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LOC100287896 (100287896)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 100287896 LOC100287896 uncharacterized LOC100287896 NM_001319240.1 76% 76% 1_282del
2 human 100287896 LOC100287896 uncharacterized LOC100287896 XM_017017055.1 76% 76% 1_282del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
960
ORF length:
894
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC CACCATATAT GACCTGAAGA AACAGAAGGA TAAACTGTTG AAGTTTTATG
121CTGAAAGTGA TGAGCAGATA TTAATGAAAA ATAGAAAAAC ACTTCATAAA GCTAAAAATG
181AAGATCTTGA TCGTGTATTG AAAGAGTGGA TCCGTCAGCG TCGCAGTGAA CACATGCCAC
241TTAATGGTAT GCTGATCATG AAACAAGCAA AGATATATCA CAATGAACTA AAAATTGAGG
301GGAACTGTGA ATATTCAACA GGCTGGTTGC AGAAATTTAA GAAAAGACAT GGCATTAAAT
361TTTTAAAGAC TTGTGGCAAT AAAGCATCTG CTGGTCATGA AGCAACAGAG AAGTTTACTG
421GCAAGTTCAG TAATGATGAT GAACAAGATG GTAACTTTGA AGGATTCAGT ATGTCAAGTG
481AGAAAAAAAT AATGTCTGAC CTCCTTACAT ATACAAAAAA TATACATCCA GAGACTGTCA
541GTAAGCTGGA AGAAGAGGAT ATCAAAGATG TTTTTAACAG TAATAATGAG GCTCCAGTTG
601TTCATTCATT GTCCAATGGT GAAGTAACAA AAATGGTTCT GAATCAAGAT GATCATGATG
661ATAATGATAA TGAAGATGAT GTTAACACTG CAGAAAAAGT GCCTATAGAC GACATGGTAA
721AAATGTGTGA TGGGCTTATT AAAGGACTAG AGCAGCATGC ATTCATAACA GAGCAAGAAA
781TCATGTCAGT TTATAAAATC AAAGAGAGAC TTCTAAGACA AAAAGCATCA TTAATGAGGC
841AGATGACTCT GAAAGAAACA TTTAAAAAAG CCATCCAGAG GAATGCTTCT TCCTCTCTAC
901AGGACCCACT TCTTGGTCCC TCAACTGCTT CTGATGCTTC TTCTCACCTA AAAATAAAAT
961ACCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1021acgaac

Download FASTA (ORF) (Full)