Construct: ORF ccsbBroadEn_14228

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008852.1_s300c1, BRDN0000457469
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
ADGRG6 (57211)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57211 ADGRG6 adhesion G protein-coupled ... NM_001032395.2 99.8% 33.9% (many diffs)
2 human 57211 ADGRG6 adhesion G protein-coupled ... XM_006715518.2 99.7% 33.9% (many diffs)
3 human 57211 ADGRG6 adhesion G protein-coupled ... NM_198569.3 97.6% 33.1% (many diffs)
4 human 57211 ADGRG6 adhesion G protein-coupled ... XM_006715516.2 97.5% 33.1% (many diffs)
5 human 57211 ADGRG6 adhesion G protein-coupled ... XM_006715517.2 97.5% 33% (many diffs)
6 human 57211 ADGRG6 adhesion G protein-coupled ... XM_011535964.1 97.4% 33% (many diffs)
7 human 57211 ADGRG6 adhesion G protein-coupled ... NM_001032394.2 95% 34.7% (many diffs)
8 human 57211 ADGRG6 adhesion G protein-coupled ... NM_020455.5 92.9% 33.9% (many diffs)
9 human 57211 ADGRG6 adhesion G protein-coupled ... XM_005267061.3 92.8% 33.9% (many diffs)
10 human 57211 ADGRG6 adhesion G protein-coupled ... XM_017011085.1 86.6% 37.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
67
ORF end:
1336
ORF length:
1269
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCCATGA TGTTTCGCTC AGATCGAATG TGGAGCTGCC ATTGGAAATG GAAGCCCAGT
121CCTCTCCTGT TCTTATTTGC TTTATATATC ATGTGTGTTC CTCACTCAGT GTGGGGATGT
181GCCAACTGCC GAGTGGTTTT GTCCAACCCT TCTGGGACCT TTACTTCTCC ATGCTACCCT
241AACGACTACC CAAACAGCCA GGCTTGCATG TGGACGCTCC GAGCCCCCAC CGGTTATATC
301ATTCAGATAA CATTTAACGA CTTTGACATT GAAGAAGCTC CCAATTGCAT TTATGACTCA
361TTATCCCTTG ATAATGGAGA GAGCCAGACT AAATTTTGTG GAGCAACTGC CAAAGGCCTA
421TCATTTAACT CAAGTGCGAA TGAGATGCAT GTGTCCTTTT CAAGTGACTT TAGCATCCAG
481AAGAAAGGTT TCAATGCCAG CTACATCAGA GTTGCCGTGT CCTTAAGGAA TCAAAAGGTC
541ATTTTACCCC AGACATCAGA TGCTTACCAG GTATCTGTTG CAAAAAGCAT CTCTATTCCA
601GAGCTCAGTG CTTTCACACT CTGCTTTGAA GCAACCAAAG TTGGCCATGA AGACAGTGAT
661TGGACAGCTT TCTCCTACTC AAATGCATCC TTCACACAAT TGCTCAGTTT TGGAAAGGCC
721AAGAGTGGCT ACTTTCTATC CATTTCTGAT TCACAATGTT TGTTGAATAA TGCATTACCT
781GTCAAAGAAA AAGAAGACAT TTTTGCAGAA AGCTTTGAAC AGCTCTGCCT TGTTTGGAAT
841AATTCTTTGG GCTCTATTGG TGTAAATTTC AAAAGAAACT ATGAAACAGT TCCATGTGAT
901TCTACCATTA GTAAAGTTAT TCCTGGGAAT GGGAAATTGT TGTTGGGCTC CAATCAAAAT
961GAAATTGTCT CTCTAAAAGG GGACATTTAT AACTTTCGAC TTTGGAATTT TACCATGAAT
1021GCCAAAATCC TCTCCAACCT CAGCTGTAAT GTGAAAGGGA ATGTAGTCGA CTGGCAAAAT
1081GACTTCTGGA ATATCCCAAA CCTAGCTCTG AAAGCTGAAA GCAACCTAAG CTGTGGTTCC
1141TACCTGATCC CGCTCCCAGC AGCAGAACTG GCCAGCTGTG CAGACCTGGG GACCCTCTGT
1201CAAGATGGAA TTATCTATAG AATATCCGTA GTGATTCAGA ACATCCTTCG TCACCCTGAG
1261GTAAAAGTAC AGAGCAAGGT GGCAGAATGG CTCAATTCAA CCTTCCAAAA ATTGGAACTA
1321CACGGTTTAT GTCGTTAATA TCAGTTTTCA CCTGAGTGCT GGAGAGGACA AGATTAAAGT
1381CAAGAGAAGC CTTGAGGATG AGCCAAGGTT GGTGCTTTGG GCCCTTCTAG TTTACAATGC
1441TACCAACAAT ACTAATTTAG AAGGAAAAAT CATTCAGCAG AAGCTCCTAA AAAATAATGA
1501GTCCTTGGAT GAAGGCTTGA GGCTACATAC AGTGAATGTG AGACAACTGG GTCATTGTCT
1561TGCCATGGAG GAACCCAAAG GCTACTACTG GCCATCTATC CAACCTTCTG AATACGTTCT
1621TCCTTGTCCA GACAAGCCTG GCTTTTCTGC TTCTCGGATA TGTTTTTACA ATGCTACCAA
1681CCCATTGGTA ACCTACTGGG GACCTGTTGA TATCTCCAAC TGTTTAAAAG AAGCAAATGA
1741AGTTGCTAAC CAGATTTTAA ATTTAACTGC TGATGGGCAG AACTTAACCT CAGCCAATAT
1801TACCAACATT GTGGAACAGG TCAAAAGAAT TGTGAATAAA GAAGAAAACA TTGATATAAC
1861ACTTGGCTCA ACTCTAATGA ATATATTTTC TAATATCTTA AGCAGTTCAG ACAGTGACTT
1921GCTTGAGTCA TCTTCTGAAG CTTTAAAAAC AATTGATGAA TTGGCCTTCA AGATAGACCT
1981AAATAGCACA TCACATGTGA ATATTACAAC TCGGAACTTG GCTCTCAGCG TATCATCCCT
2041GTTACCAGGG ACAAATGCAA TTTCAAATTT TAGCATTGGT CTTCCAAGCA ATAATGAATC
2101GTATTTCCAG ATGGATTTTG AGAGTGGACA AGTGGATCCA CTGGCATCTG TAATTTTGCC
2161TCCAAACTTA CTTGAGAATT TAAGTCCAGA AGATTCTGTA TTAGTTAGAA GAGCACAGTT
2221TACTTTCTTC AACAAAACTG GACTTTTCCA GGATGTAGGA CCCCAAAGAA AAACTTTAGT
2281GAGTTATGTG ATGGCGTGCA GTATTGGAAA CATTACTATC CAGAATCTGA AGGATCCTGT
2341TCAAATAAAA ATCAAACATA CAAGAACTCA GGAAGTGCAT CATCCCATCT GTGCCTTCTG
2401GGATCTGAAC AAAAACAAAA GTTTTGGAGG ATGGAACACG TCAGGATGTG TTGCACACAG
2461AGATTCAGAT GCAAGTGAGA CAGTCTGCCT GTGTAACCAC TTCACACACT TTGGAGTTCT
2521GATGGACCTT CCAAGAAGTG CCTCACAGTT AGATGCAAGA AACACTAAAG TCCTCACTTT
2581CATCAGCTAT ATTGGGTGTG GAATATCTGC TATTTTTTCA GCAGCAACTC TCCTGACATA
2641TGTTGCTTTT GAGAAATTGC GAAGGGATTA TCCCTCCAAA ATCTTGATGA ACCTGAGCAC
2701AGCCCCGCTG TTCCTGAATC TCCTCTTCCT CCTAGATGGC TGGATCACCT CCTTCAATGT
2761GGATGGACTT TGCATTGCTG TTGCAGTCCT GTTGCATTTC TTCCTTCTGG CAACCTTTAC
2821CTGGATGGGG CTAGAAGCAA TTCACATGTA CATTGCTCTA GTTAAAGTAT TTAACACTTA
2881CATTCGCCGA TACATTCTAA AATTCTGCAT CATTGGCTGG GGTTTGCCTG CCTTAGTGGT
2941GTCAGTTGTT CTAGCGAGCA GAAACAACAA TGAAGTCTAT GGAAAAGAAA GTTATGGGAA
3001AGAAAAAGGT GATGAATTCT GTTGGATTCA AGATCCAGTC ATATTTTATG TGACCTGTGC
3061TGGGTATTTT GGAGTCATGT TTTTTCTGAA CATTGCCATG TTCATTGTGG TAATGGTGCA
3121GATCTGTGGG AGGAATGGCA AGAGAAGCAA CCGGACCCTG AGAGAAGAAG TGTTAAGGAA
3181CCTGCGCAGT GTGGTTAGCT TGACCTTTCT GTTGGGCATG ACATGGGGTT TTGCATTCTT
3241TGCCTGGGGA CCCTTAAATA TCCCCTTCAT GTACCTCTTC TCCATCTTCA ATTCATTACA
3301AGGCTTATTT ATATTCATCT TCCACTGTGC TATGAAGGAG AATGTTCAGA AACAGTGGCG
3361GCGGCATCTC TGCTGTGGTA GATTTCGGTT AGCAGATAAC TCAGATTGGA GTAAGACAGC
3421TACCAATATC ATCAAGAAAA GTTCTGATAA TCTAGGAAAA TCTTTGTCTT CAAGCTCCAT
3481TGGTTCCAAC TCAACCTATC TTACATCCAA ATCTAAATCC AGCTCTACCA CCTATTTCAA
3541AAGGAATAGC CACACAGACA GTGCTTCCAT GGACAAGTCC TTGTCAAAAC TGGCCCATGC
3601TGATGGAGAT CAAACATCAA TCATCCCTGT CCATCAGGTC ATTGATAAGG TCAAGGGTTA
3661TTGCAATGCT CATTCAGACA ACTTCTATAA AAATATTATC ATGTCAGACA CCTTCAGCCA
3721ACAGCACAAA GTTTTTGCCA ACTTTCTTGT ACAAAGTTGG cattataaga aagcattgct
3781tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)