Construct: ORF ccsbBroadEn_14231

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017259.1_s300c1, BRDN0000385748
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KIAA1257 (57501)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57501 KIAA1257 KIAA1257 NM_001348522.1 99.8% 99.6% 881C>A
2 human 57501 KIAA1257 KIAA1257 NM_001348523.1 99.8% 99.6% 881C>A
3 human 57501 KIAA1257 KIAA1257 NM_020741.3 72.5% 72.3% 1_336del;1217C>A
4 human 57501 KIAA1257 KIAA1257 XM_017006948.2 27.4% 27.4% (many diffs)
5 human 57501 KIAA1257 KIAA1257 XM_017006950.2 27.4% 27.4% (many diffs)
6 human 57501 KIAA1257 KIAA1257 XM_024453688.1 27.4% 27.4% (many diffs)
7 human 57501 KIAA1257 KIAA1257 XM_017006946.2 26.2% 26.2% (many diffs)
8 human 57501 KIAA1257 KIAA1257 XM_017006945.1 25.7% 25.7% (many diffs)
9 human 57501 KIAA1257 KIAA1257 XM_011513050.2 25% 25% (many diffs)
10 human 57501 KIAA1257 KIAA1257 XM_017006944.2 24.7% 24.7% (many diffs)
11 human 57501 KIAA1257 KIAA1257 XM_017006939.2 24.1% 24% (many diffs)
12 human 57501 KIAA1257 KIAA1257 XM_017006940.2 24.1% 24% (many diffs)
13 human 57501 KIAA1257 KIAA1257 XM_017006941.2 24.1% 24% (many diffs)
14 human 57501 KIAA1257 KIAA1257 XM_017006942.2 24.1% 24% (many diffs)
15 human 57501 KIAA1257 KIAA1257 XM_017006947.2 21.4% 17.4% (many diffs)
16 human 57501 KIAA1257 KIAA1257 XM_017006951.2 19.2% 19.2% (many diffs)
17 human 57501 KIAA1257 KIAA1257 XM_017006952.2 19.2% 19.2% (many diffs)
18 human 57501 KIAA1257 KIAA1257 XM_017006953.2 19.2% 19.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
957
ORF length:
891
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCG TCGTTTTTAC CACATTGAGT ATTTCCTTCT GCCGGACGAT GAAGAACCTA
121AAAAAGTTGA CATATTGCTA TTTCCAATGG TGGCCAAAGT ATTCCTGGAG TCAGGAGTAA
181AGACTGTGAA GCCGTGGCAC GAAGGTGACA AAGCCTGGGT GTCGTGGGAG CAGACTTTTA
241ATATCACTGT GACAAAGGAA TTATTAAAGA AAATAAATTT CCACAAAATC ACCTTGAGGC
301TCTGGAACAC TAAAGACAAG ATGTCAAGAA AAGTCAGATA TTACCGATTA AAGACTGCCG
361GCTTCACAGA CGACGTGGGA GCTTTTCATA AGTCAGAAGT GAGACATTTG GTTTTAAATC
421AGAGAAAATT ATCTGAACAG GGCATTGAGA ATACCAACAT TGTCAGAGAA GAGTCGAACC
481AGGAACATCC GCCAGGAAAA CAAGAAAAAA CAGAAAAACA CCCAAAGTCT TTGCAAGGTT
541CTCACCAAGC AGAGCCCGAA ACTTCTTCCA AGAACAGTGA GGAATATGAG AAGTCCCTCA
601AAATGGACGA TTCTTCCACG ATTCAATGGA GTGTTTCAAG AACACCAACC ATTTCTTTGG
661CAGGAGCAAG CATGATGGAG ATCAAGGAAT TAATTGAGAG TGAATCACTT AGCAGCTTAA
721CAAACATATT AGACAGACAA AGGTCTCAAA TTAAAGGGAA AGATTCAGAG GGAAGAAGGA
781AAATCCAGAG GAGACATAAG AAGCCCCTGG CAGAAGAAGA GGCAGACCCC ACGCTGACAG
841GCCCCAGGAA GCAGAGCGCT TTCTCCATCC AGCTGGCCGT CATGCCGCTC CTTGCCGGTA
901CCCACTGCTT GCCCTGTTCC CAGCAGCTCC TGCTTGTCTT GTGGCAAGAA CGGCCATACC
961CAACTTTCTT GTACANAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1021aac

Download FASTA (ORF) (Full)