Construct: ORF ccsbBroadEn_14331

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004484.1_s300c1, BRDN0000385860
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNK17 (89822)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 89822 KCNK17 potassium two pore domain c... NM_031460.4 99.6% 98.7% 8G>A;61A>G;992delA
2 human 89822 KCNK17 potassium two pore domain c... NM_001135111.2 75.4% 69.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1062
ORF length:
996
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTA CCAACCGCGA GCCCGGGCGG CTCCCGAGGG CAGGGTCCGG GGCTGCGCGG
121TGCCCGGCAC CGTGCTCCTG CTGCTCGCCT ACCTGGCTTA CCTGGCGCTG GGCACCGGCG
181TGTTCTGGAC GCTGGAGGGC CGCGCGGCGC AGGACTCCAG CCGCAGCTTC CAGCGCGACA
241AGTGGGAGCT GTTGCAGAAC TTCACGTGTC TGGACCGCCC GGCGCTGGAC TCGCTGATCC
301GGGATGTCGT CCAAGCATAC AAAAACGGAG CCAGCCTCCT CAGCAACACC ACCAGCATGG
361GGCGCTGGGA GCTCGTGGGC TCCTTCTTCT TTTCTGTGTC CACCATCACC ACCATTGGCT
421ATGGCAACCT GAGCCCCAAC ACGATGGCTG CCCGCCTCTT CTGCATCTTC TTTGCCCTTG
481TGGGGATCCC ACTCAACCTC GTGGTGCTCA ACCGACTGGG GCATCTCATG CAGCAGGGAG
541TAAACCACTG GGCCAGCAGG CTGGGGGGCA CCTGGCAGGA TCCTGACAAG GCGCGGTGGC
601TGGCGGGCTC TGGCGCCCTC CTCTCGGGCC TCCTGCTCTT CCTGCTGCTG CCACCGCTGC
661TCTTCTCCCA CATGGAGGGC TGGAGCTACA CAGAGGGCTT CTACTTCGCC TTCATCACCC
721TCAGCACCGT GGGCTTCGGC GACTACGTGA TTGGAATGAA CCCCTCCCAG AGGTACCCAC
781TGTGGTACAA GAACATGGTG TCCCTGTGGA TCCTCTTTGG GATGGCATGG CTGGCCTTGA
841TCATCAAACT CATCCTCTCC CAGCTGGAGA CGCCAGGGAG GGTATGTTCC TGCTGCCACC
901ACAGCTCTAA GGAAGACTTC AAGTCCCAAA GCTGGAGACA GGGACCTGAC CGGGAGCCAG
961AGTCCCACTC CCCACAGCAA GGATGCTATC CAGAGGGACC CATGGGAATC ATACAGCATC
1021TGGAACCTTC TGCTCACGCT GCAGGCTGTG GCAAGGCAGC TACCCAACTT TCTTGTACAA
1081AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)