Construct: ORF ccsbBroadEn_14357

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008132.1_s300c1, BRDN0000456619
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF618 (114991)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 114991 ZNF618 zinc finger protein 618 XM_011518209.3 95.8% 94.8% (many diffs)
2 human 114991 ZNF618 zinc finger protein 618 NM_133374.2 63.1% 62.9% 1_951del;1705A>G;2374G>A
3 human 114991 ZNF618 zinc finger protein 618 XM_005251699.3 62.2% 62% 1_987del;1741A>G;2410G>A
4 human 114991 ZNF618 zinc finger protein 618 XM_017014252.2 62.1% 62% 1_990del;1744A>G;2413G>A
5 human 114991 ZNF618 zinc finger protein 618 XM_017014251.2 61.7% 61.5% 1_1008del;1762A>G;2431G>A
6 human 114991 ZNF618 zinc finger protein 618 XM_017014250.2 60.8% 60.6% 1_1047del;1801A>G;2470G>A
7 human 114991 ZNF618 zinc finger protein 618 XM_017014249.2 59.8% 59.6% 1_1092del;1846A>G;2515G>A
8 human 114991 ZNF618 zinc finger protein 618 XM_017014248.2 59.7% 59.6% 1_1095del;1849A>G;2518G>A
9 human 114991 ZNF618 zinc finger protein 618 NM_001318040.1 58.9% 58.8% 1_1131del;1885A>G;2554G>A
10 human 114991 ZNF618 zinc finger protein 618 NM_001318041.2 58.9% 58.7% 1_1134del;1888A>G;2557G>A
11 human 114991 ZNF618 zinc finger protein 618 XM_017014247.2 58.2% 58% 1_1167del;1921A>G;2590G>A
12 human 114991 ZNF618 zinc finger protein 618 XM_011518204.3 57.9% 57.8% 1_1179del;1933A>G;2602G>A
13 human 114991 ZNF618 zinc finger protein 618 XM_017014246.2 57.7% 57.5% 1_1191del;1945A>G;2614G>A
14 human 114991 ZNF618 zinc finger protein 618 XM_017014245.2 57.6% 57.5% 1_1194del;1948A>G;2617G>A
15 human 114991 ZNF618 zinc finger protein 618 XM_017014244.2 57% 56.8% 1_1227del;1981A>G;2650G>A
16 human 114991 ZNF618 zinc finger protein 618 NM_001318042.2 56.9% 56.8% 1_1230del;1984A>G;2653G>A
17 human 114991 ZNF618 zinc finger protein 618 XM_011518203.3 56.7% 56.6% 1_1239del;1993A>G;2662G>A
18 human 114991 ZNF618 zinc finger protein 618 XM_011518201.2 56% 55.9% 1_1275del;2029A>G;2698G>A
19 human 114991 ZNF618 zinc finger protein 618 XM_017014243.2 55.8% 55.7% 1_1287del;2041A>G;2710G>A
20 human 114991 ZNF618 zinc finger protein 618 XM_017014242.2 55.7% 55.6% 1_1290del;2044A>G;2713G>A
21 human 114991 ZNF618 zinc finger protein 618 XM_011518200.2 55.6% 55.4% 1_1299del;2053A>G;2722G>A
22 human 114991 ZNF618 zinc finger protein 618 XM_017014241.2 54.9% 54.8% 1_1332del;2086A>G;2755G>A
23 human 114991 ZNF618 zinc finger protein 618 XM_005251692.3 54.9% 54.8% 1_1335del;2089A>G;2758G>A
24 mouse 72701 Zfp618 zinc finger protein 618 XM_006538289.1 70.3% 77% (many diffs)
25 mouse 72701 Zfp618 zinc finger protein 618 NM_028326.1 56.6% 61.9% (many diffs)
26 mouse 72701 Zfp618 zinc finger protein 618 XM_006538288.1 53.3% 58.4% (many diffs)
27 mouse 72701 Zfp618 zinc finger protein 618 XM_017320395.1 53.1% 58.1% (many diffs)
28 mouse 72701 Zfp618 zinc finger protein 618 XM_006538291.2 53.1% 58.1% (many diffs)
29 mouse 72701 Zfp618 zinc finger protein 618 XM_006538286.1 52.9% 57.9% (many diffs)
30 mouse 72701 Zfp618 zinc finger protein 618 XM_006538287.2 52.9% 57.9% (many diffs)
31 mouse 72701 Zfp618 zinc finger protein 618 XM_006538284.2 52.2% 57.1% (many diffs)
32 mouse 72701 Zfp618 zinc finger protein 618 XM_006538283.2 51.8% 56.7% (many diffs)
33 mouse 72701 Zfp618 zinc finger protein 618 XM_017320394.1 51.3% 56.1% (many diffs)
34 mouse 72701 Zfp618 zinc finger protein 618 XM_006538282.2 50.8% 55.6% (many diffs)
35 mouse 72701 Zfp618 zinc finger protein 618 XM_006538281.2 50.5% 55.2% (many diffs)
36 mouse 72701 Zfp618 zinc finger protein 618 XM_006538280.2 50.1% 54.8% (many diffs)
37 mouse 72701 Zfp618 zinc finger protein 618 XM_006538279.2 50.1% 54.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1701
ORF length:
1632
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCAGTCCCAT GCAGCTGACA ATGAAAACAA CATTGCCTCC AACCAGTCCC
121GATCGCCACC TGCTGTTGTA GAAGAGAAGT GGAAACCTCA GGCCCAGAGG AACAGTGCCA
181ATAACACCAC TACCAGTGGT TTAACACCCA ACAGCATGAT CCCCGAAAAG GAGCGGCAGA
241ACATCGCAGA GCGGCTGTTG AGGGTCATGT GTGCCGACCT GGGTGCACTG AGCGTGGTCA
301GCGGGAAGGA GTTCCTGAAG TTGGCCCAGA CCTTAGTAGA CAGTGGTGCC CGCTATGGGG
361CCTTCTCGGT CACTGAAATC CTGGGCAACT TCAACACGCT GGCGCTGAAG CACCTGCCAC
421GCATGTACAA CCAGGTGAAG GTGAAAGTGA CCTGTGCCTT GGGCAGCAAT GCCTGCCTAG
481GCATCGGTGT CACCTGCCAC TCCCAGAGTG TTGGCCCTGA CTCCTGCTAC ATCCTCACAG
541CCTACCAGGC CGAGGGCAAC CACATCAAGA GCTATGTGCT TGGTGTGAAG GGTGCGGACA
601TTCGCGACAG CGGTGACCTT GTGCACCACT GGGTGCAGAA CGTGCTGTCG GAGTTCGTGA
661TGTCGGAGAT CAGGACAGTG TACGTGACGG ATTGCCGGGT GAGCACGTCC GCCTTCTCCA
721AGGCCGGCAT GTGCCTTCGC TGCTCAGCCT GTGCCTTGAA CTCGGTGGTG CAGAGCGTGC
781TGAGCAAGCG GACACTGCAG GCCCGCAGCA TGCACGAGGT CGTCGAGCTG CTCAACGTGT
841GCGAGGACCT GGCGGGCTCC ACGGGCCTGG CCAAGGAGAC CTTCGGGTCG CTGGAGGAGA
901CGTCTCCACC ACCCTGCTGG AACTCGGTGA CGGACTCACT GTTGCTGGTG CATGAGCGCT
961ATGAGCAGAT CTGCGAGTTC TACAGCCGGG CCAAGAAGAT GAACCTCATC CAGAGCCTCA
1021ACAAGCACCT GCTCAGCAAC CTGGCGGCCA TCCTGACGCC GGTGAAGCAG GCAGTCATCG
1081AGCTGAGCAA CGAGAGCCAG CCCACCCTGC AGCTGGTGCT GCCCACCTAC GTCAGGCTGG
1141AGAAGCTGTT CACGGCCAAG GCCAACGACG CAGGCACTGT CAGCAAGCTC TGCCACCTCT
1201TCCTGGAGGC GCTCAAGGAG AACTTCAAGG TGCACCCGGC CCACAAGGTG GCCATGATCC
1261TGGACCCGCA GCAGAAGCTG CGGCCTGTGC CACCCTACCA GCACGAGGAG ATCATCGGCA
1321AGGTCTGTGA GCTCATCAAC GAGGTGAAGG AGTCCTGGGC CGAGGAGGCC GACTTCGAGC
1381CCGCTGCCAA GAAGCCCCGC TCTGCTGCCG TCGAGAACCC CGCAGCTCAG GAAGATGATC
1441GGCTAGGCAA AAATGAAGTG TACGATTACC TGCAGGAGCC CCTCTTCCAG ACTACCCCTG
1501ATCTCTTCCA GTACTGGTCG TGCGTTACCC AAAAGCACAC AAAACTCGCC AAGCTCGCCT
1561TCTGGCTCCT GGCGGTTCCG GCCGTGGGCG CCAGAAGCGG GTGTGTAAAT ATGTGTGAAC
1621AAGCGCTTCT AATCAAACGG AGGCGGCTGC TCAGTCCAGA AGATATGAAT AAACTCATGT
1681TTCTGAAATC CAACATGCTT TTGCCAACTT TCTTGTACAA AGTTGGcatt ataagaaagc
1741attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)