Construct: ORF ccsbBroadEn_14579

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000779.2_s300c1, BRDN0000458433
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDK9 (1025)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1025 CDK9 cyclin dependent kinase 9 NM_001261.4 99.9% 100% 6A>G
2 mouse 107951 Cdk9 cyclin-dependent kinase 9 (... NM_130860.3 89.2% 98.6% (many diffs)
3 mouse 107951 Cdk9 cyclin-dependent kinase 9 (... XM_011239001.1 59% 64.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1182
ORF length:
1116
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc gaagcagtac gactcggtgg agtgcccttt ttgtgatgaa gtttccaaat
121acgagaagct cgccaagatc ggccaaggca ccttcgggga ggtgttcaag gccaggcacc
181gcaagaccgg ccagaaggtg gctctgaaga aggtgctgat ggaaaacgag aaggaggggt
241tccccattac agccttgcgg gagatcaaga tccttcagct tctaaaacac gagaatgtgg
301tcaacttgat tgagatttgt cgaaccaaag cttcccccta taaccgctgc aagggtagta
361tatacctggt gttcgacttc tgcgagcatg accttgctgg gctgttgagc aatgttttgg
421tcaagttcac gctgtctgag atcaagaggg tgatgcagat gctgcttaac ggcctctact
481acatccacag aaacaagatc ctgcataggg acatgaaggc tgctaatgtg cttatcactc
541gtgatggggt cctgaagctg gcagactttg ggctggcccg ggccttcagc ctggccaaga
601acagccagcc caaccgctac accaaccgtg tggtgacact ctggtaccgg cccccggagc
661tgttgctcgg ggagcgggac tacggccccc ccattgacct gtggggtgct gggtgcatca
721tggcagagat gtggacccgc agccccatca tgcagggcaa cacggagcag caccaactcg
781ccctcatcag tcagctctgc ggctccatca cccctgaggt gtggccaaac gtggacaact
841atgagctgta cgaaaagctg gagctggtca agggccagaa gcggaaggtg aaggacaggc
901tgaaggccta tgtgcgtgac ccatacgcac tggacctcat cgacaagctg ctggtgctgg
961accctgccca gcgcatcgac agcgatgacg ccctcaacca cgacttcttc tggtccgacc
1021ccatgccctc cgacctcaag ggcatgctct ccacccacct gacgtccatg ttcgagtact
1081tggcaccacc gcgccggaag ggcagccaga tcacccagca gtccaccaac cagagtcgca
1141atcccgccac caccaaccag acggagtttg agcgcgtctt ctgcccaact ttcttgtaca
1201aagttggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)