Construct: ORF ccsbBroadEn_14878

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019052.1_s300c1, BRDN0000458670
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
YES1 (7525)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7525 YES1 YES proto-oncogene 1, Src f... NM_005433.4 99.9% 100% 1444T>C
2 human 7525 YES1 YES proto-oncogene 1, Src f... XM_017025960.2 99.9% 100% 1444T>C
3 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451243.1 99.9% 100% 1444T>C
4 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451244.1 99.9% 100% 1444T>C
5 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451245.1 99.9% 100% 1444T>C
6 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451246.1 99.9% 100% 1444T>C
7 human 7525 YES1 YES proto-oncogene 1, Src f... XM_005258139.4 91.8% 91.8% 1289_1290ins132;1312T>C
8 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451247.1 91.8% 91.8% 1289_1290ins132;1312T>C
9 mouse 22612 Yes1 YES proto-oncogene 1, Src f... NM_001205132.1 91.1% 95.9% (many diffs)
10 mouse 22612 Yes1 YES proto-oncogene 1, Src f... NM_001205133.1 91.1% 95.9% (many diffs)
11 mouse 22612 Yes1 YES proto-oncogene 1, Src f... NM_009535.3 91.1% 95.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1698
ORF length:
1629
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcaccat gggctgcatt aaaagtaaag aaaacaaaag tccagccatt aaatacagac
121ctgaaaatac tccagagcct gtcagtacaa gtgtgagcca ttatggagca gaacccacta
181cagtgtcacc atgtccgtca tcttcagcaa agggaacagc agttaatttc agcagtcttt
241ccatgacacc atttggagga tcctcagggg taacgccttt tggaggtgca tcttcctcat
301tttcagtggt gccaagttca tatcctgctg gtttaacagg tggtgttact atatttgtgg
361ccttatatga ttatgaagct agaactacag aagacctttc atttaagaag ggtgaaagat
421ttcaaataat taacaatacg gaaggagatt ggtgggaagc aagatcaatc gctacaggaa
481agaatggtta tatcccgagc aattatgtag cgcctgcaga ttccattcag gcagaagaat
541ggtattttgg caaaatgggg agaaaagatg ctgaaagatt acttttgaat cctggaaatc
601aacgaggtat tttcttagta agagagagtg aaacaactaa aggtgcttat tccctttcta
661ttcgtgattg ggatgagata aggggtgaca atgtgaaaca ctacaaaatt aggaaacttg
721acaatggtgg atactatatc acaaccagag cacaatttga tactctgcag aaattggtga
781aacactacac agaacatgct gatggtttat gccacaagtt gacaactgtg tgtccaactg
841tgaaacctca gactcaaggt ctagcaaaag atgcttggga aatccctcga gaatctttgc
901gactagaggt taaactagga caaggatgtt tcggcgaagt gtggatggga acatggaatg
961gaaccacgaa agtagcaatc aaaacactaa aaccaggtac aatgatgcca gaagctttcc
1021ttcaagaagc tcagataatg aaaaaattaa gacatgataa acttgttcca ctatatgctg
1081ttgtttctga agaaccaatt tacattgtca ctgaatttat gtcaaaagga agcttattag
1141atttccttaa ggaaggagat ggaaagtatt tgaagcttcc acagctggtt gatatggctg
1201ctcagattgc tgatggtatg gcatatattg aaagaatgaa ctatattcac cgagatcttc
1261gggctgctaa tattcttgta ggagaaaatc ttgtgtgcaa aatagcagac tttggtttag
1321caaggttaat tgaagacaat gaatacacag caagacaagg tgcaaaattt ccaatcaaat
1381ggacagctcc tgaagctgca ctgtatggtc ggtttacaat aaagtctgat gtctggtcat
1441ttggaattct gcaaacagaa ctagtaacaa agggccgagt gccatatcca ggtatggtga
1501accgtgaagt actagaacaa gtggagcgag gatacaggat gccgtgccct cagggctgtc
1561cagaatccct ccatgaattg atgaatctgt gttggaagaa ggaccctgat gaaagaccaa
1621catttgaata tattcagtcc ttcttggaag actacttcac tgctacagag ccacagtacc
1681agccaggaga aaatttattg ccaactttct tgtacaaagt tggcattata agaaagcatt
1741gcttatcaat ttgttgcaac gaac

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