Construct: ORF ccsbBroadEn_15081

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018912.1_s300c1, BRDN0000458208
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
TRPM7 (54822)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54822 TRPM7 transient receptor potentia... NM_001301212.2 96.6% 12.1% (many diffs)
2 human 54822 TRPM7 transient receptor potentia... NM_017672.6 96.6% 12.1% (many diffs)
3 human 54822 TRPM7 transient receptor potentia... XM_017022353.2 96.1% 12% (many diffs)
4 human 54822 TRPM7 transient receptor potentia... XM_017022352.1 96.1% 12% (many diffs)
5 human 54822 TRPM7 transient receptor potentia... XM_005254486.4 95.5% 12% (many diffs)
6 human 54822 TRPM7 transient receptor potentia... XM_017022351.1 95.1% 11.9% (many diffs)
7 human 54822 TRPM7 transient receptor potentia... XM_017022350.1 95.1% 11.9% (many diffs)
8 human 54822 TRPM7 transient receptor potentia... XM_017022354.1 92.5% 8.9% (many diffs)
9 human 54822 TRPM7 transient receptor potentia... XM_017022355.1 92.5% 8.9% (many diffs)
10 human 54822 TRPM7 transient receptor potentia... XR_001751327.1 81.4% (many diffs)
11 human 54822 TRPM7 transient receptor potentia... XR_002957654.1 76.7% (many diffs)
12 human 54822 TRPM7 transient receptor potentia... XR_001751325.1 75.6% (many diffs)
13 human 54822 TRPM7 transient receptor potentia... XR_001751328.2 75.3% (many diffs)
14 human 54822 TRPM7 transient receptor potentia... XR_001751326.2 75.3% (many diffs)
15 human 54822 TRPM7 transient receptor potentia... XR_002957653.1 61.8% (many diffs)
16 human 54822 TRPM7 transient receptor potentia... NR_149152.2 51.9% (many diffs)
17 human 54822 TRPM7 transient receptor potentia... NR_149153.2 51.2% (many diffs)
18 human 54822 TRPM7 transient receptor potentia... NR_149154.2 50.5% (many diffs)
19 mouse 58800 Trpm7 transient receptor potentia... NM_001164325.1 87.9% 12% (many diffs)
20 mouse 58800 Trpm7 transient receptor potentia... NM_021450.2 87.9% 12% (many diffs)
21 mouse 58800 Trpm7 transient receptor potentia... XM_017319154.1 73% 14.4% (many diffs)
22 mouse 58800 Trpm7 transient receptor potentia... XR_001783160.1 68.8% (many diffs)
23 mouse 58800 Trpm7 transient receptor potentia... XR_001783159.1 68.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
99
ORF end:
846
ORF length:
747
Sequence:
1CTATGATTTT ATTTTGACTG ATAGTGACCT GTTCGTTGCA ACAAATTGAT GAGCAATGCT
61TTTTTATAAT GCCAACTTTG TACAAAAAAG TTGGCACCAT GTCCCAGAAA TCCTGGATAG
121AAAGCACTTT GACCAAGAGG GAATGTGTAT ATATTATACC AAGTTCCAAG GACCCTCACA
181GATGCCTTCC AGGATGTCAA ATTTGTCAGC AACTCGTCAG GTGTTTTTGT GGTCGCTTGG
241TCAAGCAACA TGCTTGTTTT ACTGCAAGTC TTGCCATGAA ATACTCAGAT GTGAAATTGG
301GTGACCATTT TAATCAGGCA ATAGAAGAAT GGTCTGTGGA AAAGCATACA GAACAGAGCC
361CAACGGATGC TTATGGAGTC ATAAATTTTC AAGGGGGTTC TCATTCCTAC AGAGCTAAGT
421ATGTGAGGCT ATCATATGAC ACCAAACCTG AAGTCATTCT GCAACTTCTG CTTAAAGAAT
481GGCAAATGGA GTTACCCAAA CTTGTTATCT CTGTACATGG GGGCATGCAG AAATTTGAGC
541TTCACCCACG AATCAAGCAG TTGCTTGGAA AAGGTCTTAT TAAAGCTGCA GTTACAACTG
601GAGCCTGGAT TTTAACTGGA GGAGTAAACA CAGGTGTGGC AAAACATGTT GGAGATGCCN
661NNAAAGAACA TGCTTCNAGA TCATCTCGAA NNNTTTGCAC TATCGGAATA GCTCCATGGG
721GAGTGATTGA AAACAGAAAT GATCTTGTTG GGAGAGATGT GGTTGCTCCT TATCAANCNC
781TTATNNAACC CCCTGAGCAA ATTGAATGTT TTGAATNATC TGCATTCCCA TTTCATATTG
841GTGGATGATG GCACTGTTGG AAAGTATGGG GCGGAAGTCA GACTGAGAAG AAGAACTTGA
901AAAAACTTAT TAATCAGCAA AGAATTCATG CTAGGATTGG CCAGGGTGTC CCTGTGGTGG
961CACTTATATT TGAGGGTGGG CCAAATGTTA TCCTCACAGT TCTTGAATAC CTTCAGGAAA
1021GCCCCCCTGT TCCAGTAGTT GTGTGTGAAG GAACAGGCAG AGCTGCAGAT CTGCTAGCGT
1081ATATTCATAA ACAAACAGAA GAAGGAGGGA ATCTTCCTGA TGCAGCAGAG CCCGATATTA
1141TTTCCACTAT CAAAAAAACA TTTAACTTTG GCCAGAATGA AGCACTTCAT TTATTTCAAA
1201CACTGATGGA GTGCATGAAA AGAAAGGAGC TTATCACTGT TTTCCATATT GGGTCAGATG
1261AACATCAAGA TATAGATGTA GCAATACTTA CTGCACTGCT AAAAGATCTG AAGAGGAATG
1321ATTATACGCC TGATAAAATT ATATTTCCTC AGGATGAGCC TTCAGATTTG AATCTTCAGC
1381CTGGAAATTC CACCAAAGAA TCAGAATCAA CTAATTCTGT TCGTCTGATG TTATTGCCAA
1441CTTTCTTGTA CAAAGTTGGC ATTATAAGAA AGCATTGCTT ATCAATTTGT TGCAACGAAC
1501AGGTCACTAT CAGTCAAAAT AAAATCATTA TTGCCATCCC AGCCTAAAAC tggaagaact
1561ttacaacact aaacaaggtc caactaatcc aatgctgttt catcttgttc gagacgtcaa
1621acagggaaat cttcctccag gatataagat cactctgatt gatataggac ttgttattga
1681atatctcatg ggaggaacct acagatgcac ctatactagg aaacgttttc gattaatata
1741taatagtctt ggtggaaata atcggaggtc tggccgaaat acctccagca gcactcctca
1801gttgcgaaag agtcatgaat cttttggcaa tagggcagat aaaaaggaaa aaatgaggca
1861taaccatttc attaagacag cacagcccta ccgaccaaag attgatacag ttatggaaga
1921aggaaagaag aaaagaacca aagatgaaat tgtagacatt gatgatccag aaaccaagcg
1981ctttccttat ccacttaatg aacttttaat ttgggcttgc cttatgaaga ggcaggtcat
2041ggcccgtttt ttatggcaac atggtgaaga atcaatggct aaagcattag ttgcctgtaa
2101gatctatcgt tcaatggcat atgaagcaaa gcagagtgac ctggtagatg atacttcaga
2161agaactaaaa cagtattcca atgattttgg tcagttggcc gttgaattat tagaacagtc
2221cttcagacaa gatgaaacca tggctatgaa attgctcact tatgaactga agaactggag
2281taattcaacc tgccttaagt tagcagtttc ttcaagactt agaccttttg tagctcacac
2341ctgtacacaa atgttgttat ctgatatgtg gatgggaagg ctgaatatga ggaaaaattc
2401ctggtacaag gtcatactaa gcattttagt tccacctgcc atattgctgt tagagtataa
2461aactaaggct gaaatgtccc atatcccaca atctcaagat gctcatcaga tgacaatgga
2521tgacagcgaa aacaactttc agaacataac agaagagatc cccatggaag tgtttaaaga
2581agtacggatt ttggatagta atgaaggaaa gaatgagatg gagatacaaa tgaaatcaaa
2641aaagcttcca attacgcgaa agttttatgc cttttatcat gcaccaattg taaaattctg
2701gtttaacacg ttggcatatt taggatttct gatgctttat acatttgtgg ttcttgtaca
2761aatggaacag ttaccttcag ttcaagaatg gattgttatt gcttatattt ttacttatgc
2821cattgagaaa gtccgtgaga tctttatgtc tgaagctggg aaagtaaacc agaagattaa
2881agtatggttt agtgattact tcaacatcag tgatacaatt gccataattt ctttcttcat
2941tggatttgga ctaagatttg gagcaaaatg gaactttgca aatgcatatg ataatcatgt
3001ttttgtggct ggaagattaa tttactgtct taacataata ttttggtatg tgcgtttgct
3061agattttcta gctgtaaatc aacaggcagg accttatgta atgatgattg gaaaaatggt
3121ggccaatatg ttctacattg tagtgattat ggctcttgta ttacttagtt ttggtgttcc
3181cagaaaggca atactttatc ctcatgaagc accatcttgg actcttgcta aagatatagt
3241ttttcaccca tactggatga tttttggtga agtttatgca tacgaaattg atgtgtgtgc
3301aaatgattct gttatccctc aaatctgtgg tcctgggacg tggttgactc catttcttca
3361agcagtctac ctctttgtac agtatatcat tatggttaat cttcttattg catttttcaa
3421caatgtgtat ttacaagtga aggcaatttc caatattgta tggaagtacc agcgttatca
3481ttttattatg gcttatcatg agaaaccagt tctgcctcct ccacttatca ttcttagcca
3541tatagtttct ctgttttgct gcatatgtaa gagaagaaag aaagataaga cttccgatgg
3601accaaaactt ttcttaacag aagaagatca aaagaaactt catgattttg aagagcagtg
3661tgttgaaatg tatttcaatg aaaaagatga caaatttcat tctgggagtg aagagagaat
3721tcgtgtcact tttgaaagag tggaacagat gtgcattcag attaaagaag ttggagatcg
3781tgtcaactac ataaaaagat cattacaatc attagattct caaattggcc atttgcaaga
3841tctttcagcc ctgacggtag atacattaaa aacactcact gcccagaaag cgtcggaagc
3901tagcaaagtt cataatgaaa tcacacgaga actgagcatt tccaaacact tggctcaaaa
3961ccttattgat gatggtcctg taagaccttc tgtatggaaa aagcatggtg ttgtaaatac
4021acttagctcc tctcttcctc aaggtgatct tgaaagtaat aatccttttc attgtaatat
4081tttaatgaaa gatgacaaag atccccagtg taatatattt ggtcaagact tacctgcagt
4141accccagaga aaagaattta attttccaga ggctggttcc tcttctggtg ccttattccc
4201aagtgctgtt tcccctccag aactgcgaca gagactacat ggggtagaac tcttaaaaat
4261atttaataaa aatcaaaaat taggcagttc atctactagc ataccacatc tgtcatcccc
4321accaaccaaa ttttttgtta gtacaccatc tcagccaagt tgcaaaagcc acttggaaac
4381tggaaccaaa gatcaagaaa ctgtttgctc taaagctaca gaaggagata atacagaatt
4441tggagcattt gtaggacaca gagatagcat ggatttacag aggtttaaag aaacatcaaa
4501caagataaaa atactatcca ataacaatac ttctgaaaac actttgaaac gagtgagttc
4561tcttgctgga tttactgact gtcacagaac ttccattcct gttcattcaa aacaagaaaa
4621aatcagtaga aggccatcta ccgaagacac tcatgaagta gattccaaag cagctttaat
4681accggtttgg ttacaagata gaccatcaaa cagagaaatg ccatctgaag aaggaacatt
4741aaatggtctc acttctccat ttaagccagc tatggataca aattactatt attcagctgt
4801ggaaagaaat aacttgatga ggttatcaca gagcattcca tttacacctg tgcctccaag
4861aggggagcct gtcacagtgt atcgtttgga agagagttca cccaacatac taaataacag
4921catgtcttct tggtcacaac taggcctctg tgccaaaata gagtttttaa gcaaagagga
4981gatgggagga ggtttacgaa gagctgtcaa agtacagtgt acctggtcag aacatgatat
5041cctcaaatca gggcatcttt atattatcaa atcttttctt ccagaggtgg ttaatacatg
5101gtcaagtatt tacaaagaag atacagttct gcatctctgt ctgagagaaa ttcaacaaca
5161gagagcagca caaaagctta cgtttgcctt taatcaaatg aaacccaaat ccataccata
5221ttctccaagg ttccttgaag ttttcctgct gtattgccat tcagcaggac agtggtttgc
5281tgtggaagaa tgtatgactg gagaatttag aaaatacaac aataataatg gagatgagat
5341tattccaact aatactctgg aagagatcat gctagccttt agccactgga cttacgaata
5401tacaagaggg gagttactgg tacttgattt gcaaggtgtt ggtgaaaatt tgactgaccc
5461atctgtgata aaagcagaag aaaagagatc ctgtgatatg gtttttggcc cagcaaatct
5521aggagaagat gcaattaaaa acttcagagc aaaacatcac tgtaattctt gctgtagaaa
5581gcttaaactt ccagatctga agaggaatga ttatacgcct gataaaatta tatttcctca
5641ggatgagcct tcagatttga atcttcagcc tggaaattcc accaaagaat cagaatcaac
5701taattctgtt cgtctgatgt tattgccaac tttcttgtac aaagttggca ttataagaaa
5761gcattgctta tcaatttgtt gcaacgaac

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