Construct: ORF ccsbBroadEn_15172

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011887.1_s300c1, BRDN0000386913
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZFP91 (80829)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80829 ZFP91 ZFP91 zinc finger protein NM_001197051.2 99.9% 99.8% 109G>A
2 human 80829 ZFP91 ZFP91 zinc finger protein NM_053023.5 99.7% 99.6% 109G>A;615_617delTAG
3 human 386607 ZFP91-CNTF ZFP91-CNTF readthrough (NMD... NR_024091.1 46.4% (many diffs)
4 mouse 109910 Zfp91 zinc finger protein 91 NM_053009.3 90.2% 91.4% (many diffs)
5 mouse 664779 Gm44505 predicted readthrough trans... NR_024093.1 45.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1773
ORF length:
1707
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC GGGGGAGACG GAAGAGCCGA GACCCCCGGA GCAGCAGGAC CAGGAAGGGG
121GAGAGGCGGC CAAGGCGGCT CCGGAGGAGC CCCAACAACG GCCCCCTGAG GCGATCGCGG
181CGGCGCCTGC AGGGACCACT AGCAGCCGCG TGCTGAGGGG AGGTCGGGAC CGAGGCCGGG
241CCGCTGcggc cgccgccgcc gcagctgtgt CCCGCCGGAG GAAGGCCGAG TATCCCCGCC
301GGCGGAGGAG CAGCCCCAGC GCCAGGCCTC CCGACGTCCC CGGGCAGCAG CCCCAGGCCG
361CGAAGTCCCC GTCTCCAGTT CAGGGCAAGA AGAGTCCGCG ACTCCTATGC ATAGAAAAAG
421TAACAACTGA TAAAGATCCC AAGGAAGAAA AAGAGGAAGA AGACGATTCT GCCCTCCCTC
481AGGAAGTTTC CATTGCTGCA TCTAGACCTA GCCGGGGCTG GCGTAGTAGT AGGACATCTG
541TTTCTCGCCA TCGTGATACA GAGAACACCC GAAGCTCTCG GTCCAAGACC GGTTCATTGC
601AGCTCATTTG CAAGTCAGAA CCAAATACAG ACCAACTTGA TTATGATGTT GGAGAAGAGC
661ATCAGTCTCC AGGTGGCATT AGTGAAGAGG AAGAGGAGGA GGAAGAAGAG ATGTTAATCA
721GTGAAGAGGA GATACCATTC AAAGATGATC CAAGAGATGA GACCTACAAA CCCCACTTAG
781AAAGGGAAAC CCCAAAGCCA CGGAGAAAAT CAGGGAAGGT AAAAGAAGAG AAGGAGAAGA
841AGGAAATTAA AGTGGAAGTA GAGGTGGAGG TGAAAGAAGA GGAGAATGAA ATTAGAGAGG
901ATGAGGAACC TCCAAGGAAG AGAGGAAGAA GACGAAAAGA TGACAAAAGT CCACGTTTAC
961CCAAAAGGAG AAAAAAGCCT CCAATCCAGT ATGTCCGTTG TGAGATGGAA GGATGTGGAA
1021CTGTCCTTGC CCATCCTCGC TATTTGCAGC ACCACATTAA ATACCAGCAT TTGCTGAAGA
1081AGAAATATGT ATGTCCCCAT CCCTCCTGTG GACGACTCTT CAGGCTTCAG AAGCAACTTC
1141TGCGACATGC CAAACATCAT ACAGATCAAA GGGATTATAT CTGTGAATAT TGTGCTCGGG
1201CCTTCAAGAG TTCCCACAAT CTGGCAGTGC ACCGGATGAT TCACACTGGC GAGAAGCCAT
1261TACAATGTGA GATCTGTGGA TTTACTTGTC GACAAAAGGC ATCTCTTAAT TGGCACATGA
1321AGAAACATGA TGCAGACTCC TTCTACCAGT TTTCTTGCAA TATCTGTGGC AAAAAATTTG
1381AGAAGAAGGA CAGCGTAGTG GCACACAAGG CAAAAAGCCA CCCTGAGGTG CTGATTGCAG
1441AAGCTCTGGC TGCCAATGCA GGCGCCCTCA TCACCAGCAC AGATATCTTG GGCACTAACC
1501CAGAGTCCCT GACGCAGCCT TCAGATGGTC AGGGTCTTCC TCTTCTTCCT GAGCCCTTGG
1561GAAACTCAAC CTCTGGAGAG TGCCTACTGT TAGAAGCTGA AGGGATGTCA AAGTCATACT
1621GCAGTGGGAC GGAACGGGTG AGCCTGATGG CTGATGGGAA GATCTTTGTG GGAAGCGGCA
1681GCAGTGGAGG CACTGAAGGG CTGGTTATGA ACTCAGATAT ACTCGGTGCT ACCACAGAGG
1741TTCTGATTGA AGATTCAGAC TCTGCCGGAC CTTACCCAAC TTTCTTGTAC AAAGTtggca
1801ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)