Construct: ORF ccsbBroadEn_15205

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001547.1_s300c1, BRDN0000398627
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GAL3ST3 (89792)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 89792 GAL3ST3 galactose-3-O-sulfotransfer... NM_033036.3 99.8% 100% 525A>G;1065G>A
2 human 89792 GAL3ST3 galactose-3-O-sulfotransfer... XM_017018519.1 91% 85% (many diffs)
3 mouse 545276 Gal3st3 galactose-3-O-sulfotransfer... NM_001024717.2 88.1% 94.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1362
ORF length:
1293
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCCACCCATC CTCCAGCGCC TGCAGCAGGC CACCAAGATG ATGAGCCGCC
121GGAAAATCCT GCTGCTGGTG CTAGGGTGCA GCACCGTAAG CCTTCTCATC CACCAGGGGG
181CGCAGCTCAG CTGGTACCCC AAGCTGTTCC CCTTGAGCTG CCCTCCTCTG CGGAACTCGC
241CGCCGCGCCC CAAGCACATG ACTGTGGCCT TCCTGAAGAC TCACAAGACG GCAGGCACGA
301CGGTGCAGAA CATCCTGTTT CGCTTTGCCG AGCGCCACAA CCTGACGGTG GCCCTGCCGC
361ACCCGAGCTG CGAGCACCAG TTCTGCTACC CCCGCAACTT CTCGGCGCAC TTCGTGCACC
421CGGCCACGCG GCCGCCGCAC GTGCTGGCCA GCCACCTGCG CTTCGACCGT GCGGAGCTGG
481AGCGCCTCAT GCCGCCCAGC ACCGTCTATG TCACCATCCT GCGCGAGCCG GCCGCCATGT
541TCGAGTCGCT CTTCAGCTAC TACAACCAGT ACTGCCCGGC CTTCCGGCGC GTGCCCAACG
601CCTCGCTCGA GGCCTTCCTG CGCGCGCCCG AGGCATACTA CCGCGCTGGC GAGCACTTCG
661CCATGTTCGC ACACAACACG CTGGCCTACG ACCTGGGCGG CGACAATGAG CGCAGCCCGC
721GCGACGACGC CGCCTACCTG GCGGGCCTCA TCCGCCAGGT GGAGGAGGTT TTCTCGCTCG
781TCATGATCGC CGAGTACTTC GACGAGTCGC TAGTGCTGCT GCGGCGCCTA CTGGCCTGGG
841ACCTGGACGA CGTGCTCTAC GCCAAGCTCA ACGCGCGCGC CGCCAGCTCG CGCCTGGCCG
901CCATCCCCGC GGCGCTGGCG CGGGCGGCGC GCACCTGGAA CGCCCTGGAC GCCGGCCTCT
961ACGACCACTT CAACGCCACC TTCTGGCGCC ACGTGGCGCG CGCGGGCCGC GCGTGCGTGG
1021AGCgcgaggc gcgcgagctg cgcgAGGCCC GCCAGCGCCT ACTGCGGCGC TGCTTCGGGG
1081ACGAGCCACT GCTGCGGCCT GCCGCGCAGA TCCGCACCAA GCAGCTGCAG CCATGGCAGC
1141CCAGCCGCAA GGTGGACATT ATGGGCTATG ACCTGCCCGG CGGCGGCGCC GGCCCGGCCA
1201CCGAGGCCTG CCTCAAGCTG GCCATGCCCG AGGTCCAGTA CTCGAACTAC CTGTTGCGCA
1261AGCAGAAGCG CCGGGGCGGT GCGCGGGCTC GGCCCGAGCC CGTCCTGGAC AATCCCCCGC
1321CTCGGCCCAT CCGAGTGCTG CCTCGCGGCC CTCAAGGTCC CTTGCCAACT TTCTTGTACA
1381AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)