Construct: ORF ccsbBroadEn_15536

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016313.1_s300c1, BRDN0000390047
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PRIM2 (5558)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5558 PRIM2 DNA primase subunit 2 NM_001282487.2 100% 100%
2 human 5558 PRIM2 DNA primase subunit 2 NM_001282488.1 100% 100%
3 human 5558 PRIM2 DNA primase subunit 2 XM_017011006.2 38.2% 37.5% (many diffs)
4 human 5558 PRIM2 DNA primase subunit 2 XM_017011005.2 32.1% 31.4% (many diffs)
5 human 5558 PRIM2 DNA primase subunit 2 NM_000947.5 30.8% 30.2% (many diffs)
6 human 5558 PRIM2 DNA primase subunit 2 XM_017011004.2 27.3% 26.8% (many diffs)
7 mouse 19076 Prim2 DNA primase, p58 subunit XM_006495797.2 55.1% 58.2% (many diffs)
8 mouse 19076 Prim2 DNA primase, p58 subunit XM_006495793.3 40.9% 43.2% (many diffs)
9 mouse 19076 Prim2 DNA primase, p58 subunit NM_008922.2 25.6% 27.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
540
ORF length:
474
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgga gttttctgga agaaagtgga ggaagctgag gttggcaggt gaccagagga
121atgcttccta ccctcattgc cttcagtttt acttgcagcc accttctgaa aacatatctt
181taatagaatt tgaaaacttg gctattgata gagttaaatt gttaaaatca gttgaaaatc
241ttggagtgag ctatgtgaaa ggaactgaac aataccagag taagttggag agtgagcttc
301ggaagctcaa gttttcctac agagaaaact tagaagatga atatgaacca cgaagaagag
361atcatatttc tcattttatt ttgcggcttg cttattgcca gtctgaagaa cttagacgct
421ggttcattca acaagaaatg gatctccttc gatttagatt tagtatttta cccaaggata
481aaattcagga tttcttaaag gatagccaat tgcagtttga ggctgtaagt atatttttgt
541nnccaacttt cttgtacaaa gttggcatta taagaaagca ttgcttatca atttgttgca
601acgaac

Download FASTA (ORF) (Full)