Construct: ORF ccsbBroadEn_15593

Construct Description:

• Construct Type: ORF
• Other Identifiers: ORF017234.1_s300c1, BRDN0000390479
• DNA Barcode: None
• Epitope Tag: None
• Notes: No stop codon in insert

Originally Annotated References:

• Gene: SLC4A2 (6522)

Vector Information:

• Vector Backbone: pDONR223
• Pol II Cassette 1: n/a
• Pol II Cassette 2: n/a
• Selection Marker: n/a
• Visible Reporter: n/a
• Epitope Tag: n/a

Current transcripts matched by this ORF:

	Taxon	Gene	Symbol	Description	Transcript	Nuc. Match %	Prot. Match %	Match Diffs
1	human	6522	SLC4A2	solute carrier family 4 mem...	NM_001199694.2	88.5%	86.7%	(many diffs)
2	human	6522	SLC4A2	solute carrier family 4 mem...	NM_001199693.1	88.1%	86.4%	(many diffs)
3	human	6522	SLC4A2	solute carrier family 4 mem...	NM_001199692.2	87.5%	85.8%	(many diffs)
4	human	6522	SLC4A2	solute carrier family 4 mem...	NM_003040.4	87.5%	85.8%	(many diffs)
5	human	6522	SLC4A2	solute carrier family 4 mem...	XM_006716094.3	41.2%	39.1%	(many diffs)
6	mouse	20535	Slc4a2	solute carrier family 4 (an...	XM_006535656.3	77.8%	82.6%	(many diffs)
7	mouse	20535	Slc4a2	solute carrier family 4 (an...	XM_006535655.3	77.5%	82.2%	(many diffs)
8	mouse	20535	Slc4a2	solute carrier family 4 (an...	NM_001253892.1	77%	81.6%	(many diffs)
9	mouse	20535	Slc4a2	solute carrier family 4 (an...	NM_009207.3	77%	81.6%	(many diffs)
10	mouse	20535	Slc4a2	solute carrier family 4 (an...	XM_006535650.1	77%	81.6%	(many diffs)
11	mouse	20535	Slc4a2	solute carrier family 4 (an...	XM_006535651.3	77%	81.6%	(many diffs)
12	mouse	20535	Slc4a2	solute carrier family 4 (an...	XM_006535653.1	76.7%	81.4%	(many diffs)

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:

66

ORF end:

3327

ORF length:

3261

Sequence:

1	gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61	ttggcatggg gaggaagact ttgagtacca ccgccagtcc tcccaccaca tccatcaccc
121	actgtccacc actgccccac caggaggcga ctcctcgggc ctccaaaggg gcccaggctg
181	gaacccaggt ggaggaggcg gaggcggagg cggtggcggt ggccagtggc actgcagggg
241	gtgacgacgg gggtgcctcg gggcgccccc tgcccaaagc ccagcctggg caccgcagct
301	acaaccttca ggagaggagg cgcatcggga gcatgactgg ggctgagcag gcactgctgc
361	cccgggtccc cacggatgag attgaggccc agacgctggc cacggccgac ctagacctca
421	tgaagagtca ccggtttgag gacgttcctg gggtgcggcg gcacttggtg cggaagaatg
481	ccaaaggttc cacacagagt ggccgagaag ggcgggagcc tggccccaca cctcgggccc
541	gaccccgggc cccccacaag ccccatgagg tgtttgtgga gctgaatgag ttgctcctgg
601	acaaaaacca ggagccccag tggcgggaga cagctcgctg gatcaaattt gaagaggacg
661	tggaggagga gaccgagcgc tgggggaagc cccacgtggc ctccctctcc ttccgcagtc
721	tcctggagct ccgcaggacc ctggcccatg gggctgtgct cttggatctg gaccagcaga
781	ccctgcccgg agtggcccac caggtggtgg agcagatggt catctctgac cagatcaagg
841	ccgaggacag ggccaacgtg ctgcgggctc tgctgttgaa acacagccac ccaagtgatg
901	agaaggactt ctccttcccc cgcaacatct cagctggctc cctgggctcc ctgctggggc
961	atcaccatgg tcagggggct gagagtgacc cccacgtcac cgagcctctc atgggaggtg
1021	ttcctgagac ccggctggag gtggagcgag agcgtgagct gccgcctcca gcaccaccag
1081	ctggcatcac ccgctccaag tccaagcacg agctgaaact gctggagaag attcctgaga
1141	atgccgaggc cacggtggtc cttgtgggct gcgtggagtt cctctcccgc cccaccatgg
1201	cctttgtgcg gctccgggag gctgtggagt tggacgcagt gttggaggtg ccggtgcctg
1261	tgcgtttcct cttcctgctg ctgggcccga gtagtgccaa catggactac cacgagatcg
1321	gccgctccat ctccaccctc atgtcagaca agcaattcca cgaggcagcc tacctggctg
1381	acgagcggga ggacctgctg acggccatca acgccttcct ggactgcagc gtggtgctgc
1441	cgccttcaga agtgcagggc gaggagctgc tgcgctctgt ggcccacttc cagcgccaga
1501	tgctcaagaa gcgagaggag cagggccggc tgctacctac aggggctggg ctggagccca
1561	aatctgccca agataaggcg ctcctgcaga tggtagaggc ggcaggggca gctgaagatg
1621	atccccttcg gcggacgggg cggccctttg gggggctgat ccgagatgtg cggcgccgct
1681	atccccacta cctgagtgac ttccgagatg cacttgaccc tcagtgcctg gccgcagtca
1741	tcttcatcta ctttgccgcc ctgtctcctg ccatcacctt tggggggctg ctgggagaga
1801	agacacagga cctgataggg gtgtcggagc tgattatgtc cacagcgctc cagggcgtgg
1861	tcttctgcct gctgggtgcc cagcccctgt tggtgatcgg cttctcaggg cccctgctgg
1921	tctttgagga ggccttcttc tcgttctgta gcagcaacca cctggagtac ctggtgggcc
1981	gtgtgtggat cggcttctgg ctggtgttcc tggccctgct catggtggcc ctggagggga
2041	gcttcctggt ccgcttcgtc tcccgcttca cccaggagat cttcgccttc ttgatctcac
2101	tcatcttcat ctatgagacc ttctacaagc tggtgaagat cttccaggag caccccctgc
2161	atggctgctc agcctccaac agctcagagg tggacggcgg tgagaacatg acatgggccg
2221	gggcaagacc cacgctgggg ccgggcaaca ggagcttggc tgggcagtct gggcagggga
2281	agccccgggg ccagcccaac acggccctgc tgtcgctggt gctcatggcc ggcaccttct
2341	tcatcgcctt cttcctgcgc aaattcaaga acagccggtt ctttcctggc cggatccggc
2401	gggtgattgg ggactttggg gtgcccatcg ccatcctcat catggtgctt gtggattaca
2461	gtattgagga cacctatacc cagaagctga gcgttcccag tggattctcg gtgactgccc
2521	cagaaaagag gggctgggtc atcaaccccc tgggagagaa gagccccttc cctgtgtgga
2581	tgatggttgc cagcctgctg cccgccatcc tggtcttcat tctcatcttc atggagacac
2641	agatcaccac gctcatcatc tccaagaagg agcgcatgct gcagaagggc tccggcttcc
2701	acctggacct gctgctcatc gtggccatgg gcggcatctg tgccctcttt ggcctgccct
2761	ggttggctgc tgccactgtc cgctctgtca ctcacgccaa cgcgctcact gtcatgagca
2821	aggctgtggc acctggggac aagcccaaga ttcaggaagt caaggagcag cgggtgacgg
2881	ggctgctggt tgccctgctt gtgggcctct ccatagttat cggggatctg ctccggcaga
2941	tccccctggc cgtgctcttt ggaattttcc tgtacatggg agtcacctcc cttaacggga
3001	tccagttcta tgagcggctg catctgctgc tcatgccgcc caaacaccac ccagatgtca
3061	cttacgtcaa gaaggtccgg accctccgta tgcacctgtt cacggccctg cagctgctct
3121	gcctggccct gctctgggcc gtcatgtcca cagctgcctc cctggccttc cccttcatcc
3181	tcatcctcac agtgccgctc cgcatggtgg tgctcacccg tatcttcacc gaccgagaga
3241	tgaaatgtct ggatgctaac gaggcagagc cggtgtttga tgagcgggag ggtgtggacg
3301	agtacaatga gatgcccatg cctgtgtnnc caactttctt gtacaaagtt ggcattataa
3361	gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA