Construct: ORF ccsbBroadEn_15619

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013136.1_s300c1, BRDN0000395370
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
VDAC2 (7417)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7417 VDAC2 voltage dependent anion cha... NM_001184823.1 96.2% 96.2% 1_33del
2 human 7417 VDAC2 voltage dependent anion cha... NM_001324088.1 96.2% 96.2% 1_33del
3 human 7417 VDAC2 voltage dependent anion cha... NM_003375.4 96.2% 96.2% 1_33del
4 human 7417 VDAC2 voltage dependent anion cha... NM_001184783.2 91.5% 91.5% 1_78del
5 human 7417 VDAC2 voltage dependent anion cha... NM_001324087.1 88.2% 86.5% (many diffs)
6 human 7417 VDAC2 voltage dependent anion cha... NM_001324089.1 88.2% 86.5% (many diffs)
7 human 7417 VDAC2 voltage dependent anion cha... NM_001324090.1 88.2% 86.5% (many diffs)
8 mouse 22334 Vdac2 voltage-dependent anion cha... NM_011695.2 88.9% 93.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
915
ORF length:
849
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgtg tattcctcca tcatatgctg accttggcaa agctgccaga gatattttca
121acaaaggatt tggttttggg ttggtgaaac tggatgtgaa aacaaagtct tgcagtggcg
181tggaattttc aacgtccggt tcatctaata cagacactgg taaagttact gggaccttgg
241agaccaaata caagtggtgt gagtatggtc tgactttcac agaaaagtgg aacactgata
301acactctggg aacagaaatc gcaattgaag accagatttg tcaaggtttg aaactgacat
361ttgatactac cttctcacca aacacaggaa agaaaagtgg taaaatcaag tcttcttaca
421agagggagtg tataaacctt ggttgtgatg ttgactttga ttttgctgga cctgcaatcc
481atggttcagc tgtctttggt tatgagggct ggcttgctgg ctaccagatg acctttgaca
541gtgccaaatc aaagctgaca aggaataact ttgcagtggg ctacaggact ggggacttcc
601agctacacac taatgtcaat gatgggacag aatttggagg atcaatttat cagaaagttt
661gtgaagatct tgacacttca gtaaaccttg cttggacatc aggtaccaac tgcactcgtt
721ttggcattgc agctaaatat cagttggatc ccactgcttc catttctgca aaagtcaaca
781actctagctt aattggagta ggctatactc agactctgag gcctggtgtg aagcttacac
841tctctgctct ggtagatggg aagagcatta atgctggagg ccacaaggtt gggctcgccc
901tggagttgga ggcttnncca actttcttgt acaaagttgg cattataaga aagcattgct
961tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)