Construct: ORF ccsbBroadEn_15640

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003625.1_s300c1, BRDN0000390028
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLA2G4C (8605)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8605 PLA2G4C phospholipase A2 group IVC XM_017027414.2 69.2% 65.5% (many diffs)
2 human 8605 PLA2G4C phospholipase A2 group IVC XM_011527433.3 50.9% 48.4% (many diffs)
3 human 8605 PLA2G4C phospholipase A2 group IVC XM_011527432.3 43.9% 41.9% (many diffs)
4 human 8605 PLA2G4C phospholipase A2 group IVC XM_017027411.2 38.4% 36.7% (many diffs)
5 human 8605 PLA2G4C phospholipase A2 group IVC XM_011527431.3 37.4% 35.7% (many diffs)
6 human 8605 PLA2G4C phospholipase A2 group IVC NM_001159323.1 37.1% 35.5% (many diffs)
7 human 8605 PLA2G4C phospholipase A2 group IVC NM_003706.3 36.2% 34.6% (many diffs)
8 human 8605 PLA2G4C phospholipase A2 group IVC NM_001159322.1 34.6% 31.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
663
ORF length:
597
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggg aagctctgaa gtttccataa ttcctgggct ccagaaagaa gaaaaggcgg
121ccgtggagag acgaagactt catgtgctga aagctctgaa gaagctaagg attgaggctg
181atgaggcccc agttgttgct gtgctgggct caggcggagg actgcgggct cacattgcct
241gccttggggt cctgagtgag atgaaagaac agggcctgtt ggatgccgtc acgtacctcg
301caggggtctc tggatccact tgggcaatat cttctctcta caccaatgat ggtgacatgg
361aagctctcga ggctgacctg aaacatcgat ttacccgaca ggagtgggac ttggctaaga
421gcctacagaa aaccatccaa gcagcgaggt ctgagaatta ctctctgacc gacttctggg
481cctacatggt tatctctaag caaaccagag aactgccgga gtctcatttg tccaatatga
541agaagcccgt ggaagaaggg acactaccct acccaatatt tgcagccatt gacaatgacc
601tgcaaccttc ctggcaggag gcaagagcac caggtaagca aacatttaga gggagggaga
661ggtnnccaac tttcttgtac aaagttggca ttataagaaa gcattgctta tcaatttgtt
721gcaacgaac

Download FASTA (ORF) (Full)