Construct: ORF ccsbBroadEn_15684

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016379.1_s300c1, BRDN0000391085
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP44 (9912)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9912 ARHGAP44 Rho GTPase activating prote... NM_001321168.2 19.1% 19.1% 1_1377del
2 human 9912 ARHGAP44 Rho GTPase activating prote... XM_005256891.2 14.7% 14.4% (many diffs)
3 human 9912 ARHGAP44 Rho GTPase activating prote... NM_001321164.2 14.1% 14.1% 1_1977del
4 human 9912 ARHGAP44 Rho GTPase activating prote... NM_001321167.2 14% 14% 1_1995del
5 human 9912 ARHGAP44 Rho GTPase activating prote... NM_001321166.2 13.3% 13.1% (many diffs)
6 human 9912 ARHGAP44 Rho GTPase activating prote... NM_014859.6 13.2% 13% (many diffs)
7 human 9912 ARHGAP44 Rho GTPase activating prote... NR_135569.2 8.4% (many diffs)
8 mouse 216831 Arhgap44 Rho GTPase activating prote... XM_017314452.1 13.7% 14.2% (many diffs)
9 mouse 216831 Arhgap44 Rho GTPase activating prote... XM_006532874.3 13% 13.3% (many diffs)
10 mouse 216831 Arhgap44 Rho GTPase activating prote... XM_006532873.3 12.8% 13.1% (many diffs)
11 mouse 216831 Arhgap44 Rho GTPase activating prote... NM_175003.3 12.3% 12.8% (many diffs)
12 mouse 216831 Arhgap44 Rho GTPase activating prote... XM_006532872.3 12.2% 12.7% (many diffs)
13 mouse 216831 Arhgap44 Rho GTPase activating prote... NM_001099288.1 11.6% 11.8% (many diffs)
14 mouse 216831 Arhgap44 Rho GTPase activating prote... XM_006532871.3 11.5% 11.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
393
ORF length:
327
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc agaccagtcc gctggccagc cgtccccagt cagcctgtcc cccaccccgc
121ccagcacccc gtcaccctat ggactgagct accctcaggg gtactccttg gcctcgggcc
181agctctcccc agctgcagct cctcccctgg cctctccttc tgtctttaca agcactttga
241gcaaatcgcg gcccactcct aagccgcgac agagacctac tctgccgcct cctcagcctc
301ccacagtaaa cctctcggcc tctagtccac agtccacgga ggcccccatg ctagatggca
361tgtcccctgg ggaaagcatg tctacagctg tgtnnccaac tttcttgtac aaagttggca
421ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)