Construct: ORF ccsbBroadEn_15713

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002099.1_s300c1, BRDN0000385235
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TADA3 (10474)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10474 TADA3 transcriptional adaptor 3 NM_133480.2 100% 100%
2 human 10474 TADA3 transcriptional adaptor 3 NM_001278270.1 85.4% 85.4% 1108_1296del
3 human 10474 TADA3 transcriptional adaptor 3 NM_006354.3 85.4% 85.4% 1108_1296del
4 mouse 101206 Tada3 transcriptional adaptor 3 NM_133932.2 77.1% 84.7% (many diffs)
5 mouse 101206 Tada3 transcriptional adaptor 3 XM_006505238.3 75.7% 83.1% (many diffs)
6 mouse 101206 Tada3 transcriptional adaptor 3 XM_006505239.3 75.7% 83.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1173
ORF length:
1107
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgag tgagttgaaa gactgcccct tgcagttcca cgacttcaag tctgtggatc
121acctgaaggt ctgtccccgc tacacggcag tgctggcacg ctctgaggat gatggcatcg
181gcatcgagga gctggacacc ctgcagctgg agctggagac cctgctgtct tctgccagcc
241ggcgcctgcg tgtgcttgag gccgaaaccc agatcctcac cgactggcag gataagaaag
301gtgacagacg attcctgaag ctgggtcgag accatgaact tggagctccc cccaaacatg
361ggaagcccaa gaagcagaaa ctggaaggga aggcaggaca tgggccgggc cctggcccag
421gacggcccaa atccaaaaac cttcagccca agatccagga atatgaattc actgatgacc
481ctatcgacgt gccacggatc cccaaaaatg atgcccccaa caggttctgg gcttcagtgg
541agccctactg tgctgacatc accagcgagg aggtccgcac acttgaggag ttactgaagc
601ccccagaaga tgaggctgag cattacaaga tcccacccct ggggaagcac tactcccagc
661gctgggccca ggaggacctg ctggaggagc agaaggatgg ggcccgggca gcggctgtgg
721ctgacaagaa gaaaggcctc atggggccac tgaccgaact ggacactaaa gatgtggatg
781ccctgctgaa gaagtctgag gcccagcatg aacagccgga agatggatgc ccctttggtg
841ccctgacgca gcgcctcctg caggccctgg tggaggaaaa tattatttcc cctatggagg
901attctcctat tcctgacatg tctgggaaag aatcaggggc tgacggggca agcacctccc
961ctcgcaatca gaacaagccc ttcagtgtgc cgcatactaa gtccctggag agccgcatca
1021aggaggagct aattgcccag ggccttttgg agtctgagga ccgccccgca gaggactccg
1081aggatgaggt ccttgctgag cttcgcaaac ggcaggctga gctgaaggca cttagtgccc
1141acaaccgcac caagaagcac gacctgctga ggtnnccaac tttcttgtac aaagttggca
1201ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)