Construct: ORF ccsbBroadEn_15984

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004970.1_s300c1, BRDN0000392386
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NAA16 (79612)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79612 NAA16 N(alpha)-acetyltransferase ... NM_018527.4 99.8% 100% 771T>C
2 human 79612 NAA16 N(alpha)-acetyltransferase ... XM_017020746.2 91.7% 89.7% (many diffs)
3 human 79612 NAA16 N(alpha)-acetyltransferase ... XM_017020745.2 86.1% 85.1% (many diffs)
4 human 79612 NAA16 N(alpha)-acetyltransferase ... NM_001110798.2 72.4% 69.8% 771T>C;906_1012del;1041_1287del
5 human 79612 NAA16 N(alpha)-acetyltransferase ... XM_011535228.2 58.6% 56.6% 771T>C;906_1012del;1041_1590del
6 human 79612 NAA16 N(alpha)-acetyltransferase ... XM_011535227.3 38.7% 37.5% 771T>C;906_1012del;1041_2403del
7 human 79612 NAA16 N(alpha)-acetyltransferase ... XM_006719866.3 38.3% 37.9% (many diffs)
8 human 79612 NAA16 N(alpha)-acetyltransferase ... NM_024561.5 35.9% 34.8% 771T>C;906_1012del;1041_2592del
9 human 79612 NAA16 N(alpha)-acetyltransferase ... XR_002957473.1 21.9% (many diffs)
10 human 79612 NAA16 N(alpha)-acetyltransferase ... XR_001749673.2 21.4% 1_290del;1061T>C;1224_4350del
11 human 79612 NAA16 N(alpha)-acetyltransferase ... XR_001749671.2 21.2% (many diffs)
12 human 79612 NAA16 N(alpha)-acetyltransferase ... XR_001749669.2 20.9% (many diffs)
13 human 79612 NAA16 N(alpha)-acetyltransferase ... XR_001749670.2 17.6% (many diffs)
14 human 79612 NAA16 N(alpha)-acetyltransferase ... XR_001749675.2 11.2% 1_290del;1061T>C;1224_8303del
15 mouse 66897 Naa16 N(alpha)-acetyltransferase ... XR_383205.1 45.8% (many diffs)
16 mouse 66897 Naa16 N(alpha)-acetyltransferase ... NM_025832.2 31.9% 31.7% (many diffs)
17 mouse 66897 Naa16 N(alpha)-acetyltransferase ... XR_001781145.1 27.7% (many diffs)
18 mouse 66897 Naa16 N(alpha)-acetyltransferase ... XR_001781144.1 20% (many diffs)
19 mouse 66897 Naa16 N(alpha)-acetyltransferase ... XM_006519399.1 18.2% 17.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
999
ORF length:
933
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgcc gaacgtgctg ctgccgccca aggagagcaa cctcttcaaa cgcatcttga
121aatgttatga acagaagcag tacaaaaatg gcctcaagtt ttgcaagatg attctgtcga
181acccaaaatt tgctgaacat ggagagactt tggctatgaa aggattaaca ctgaactgtt
241taggaaaaaa agaagaagct tatgagtttg ttcgtaaagg acttcgtaat gatgtcaaga
301gtcatgtctg ttggcatgta tatggactct tgcagcgttc tgataaaaaa tatgatgaag
361ctataaaatg ttaccgaaat gccctcaaat tagataaaga taacctgcaa attttgaggg
421atctctcact gttgcagatc caaatgagag accttgaagg ttaccgagag acaagatacc
481agcttcttca gttgcgcccc acacagcgtg cctcctggat tggatatgct attgcatacc
541atttgctgaa agattatgat atggccctaa aactgttgga agaatttaga caaactcagc
601aagttcctcc aaacaaaata gattatgaat atagtgaatt gatattatac cagaatcaag
661tgatgagaga ggcagatctg ttgcaggaat ctttggaaca tatagaaatg tatgagaaac
721aaatatgtga taaacttttg gtggaagaaa ttaaagggga aatactgttg aaattgggaa
781gattaaaaga agccagtgaa gtgttcaaaa acttgattga tcgaaatgca gaaaactggt
841gttattatga aggcttggaa aaagctctac aaattagcac tttagaagag aggcttcaaa
901tttatgaaga aattagtaag cagcacccca aagcaattac acccagaaga ttacctttga
961ctcttgtccc aggtttctat aatccaggaa cttgttactn nccaactttc ttgtacaaag
1021ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)