Transcript: Human NM_001005339.2

Homo sapiens regulator of G protein signaling 10 (RGS10), transcript variant 1, mRNA.

Source:
NCBI, updated 2019-08-07
Taxon:
Homo sapiens (human)
Gene:
RGS10 (6001)
Length:
923
CDS:
82..627

Additional Resources:

NCBI RefSeq record:
NM_001005339.2
NBCI Gene record:
RGS10 (6001)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001005339.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000421429 CCTCAAGAGCACAGCCAAATG pLKO_005 174 CDS 100% 10.800 8.640 N RGS10 n/a
2 TRCN0000036943 CTCCAGGACCAGATCTTTAAT pLKO.1 469 CDS 100% 15.000 10.500 N RGS10 n/a
3 TRCN0000416121 TTGGCTAGCATGTGAAGATTT pLKO_005 291 CDS 100% 13.200 9.240 N RGS10 n/a
4 TRCN0000420896 GAAGACCCAGAAGGCGTGAAA pLKO_005 220 CDS 100% 4.950 3.465 N RGS10 n/a
5 TRCN0000036942 TGATGCTCAAACTGCAGCTAA pLKO.1 579 CDS 100% 4.950 3.465 N RGS10 n/a
6 TRCN0000036941 GCACCCTCTGATGTTCCAGAA pLKO.1 447 CDS 100% 4.050 2.835 N RGS10 n/a
7 TRCN0000036940 GCAAGATAAGACGCAGATGCA pLKO.1 321 CDS 100% 2.640 1.848 N RGS10 n/a
8 TRCN0000433979 TTATTTGTAAGGACTGAAATG pLKO_005 709 3UTR 100% 10.800 6.480 N RGS10 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001005339.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.