Transcript: Mouse NM_001025432.1

Mus musculus CREB binding protein (Crebbp), mRNA.

Source:
NCBI, updated 2017-05-20
Taxon:
Mus musculus (mouse)
Gene:
Crebbp (12914)
Length:
7507
CDS:
182..7507

Additional Resources:

NCBI RefSeq record:
NM_001025432.1
NBCI Gene record:
Crebbp (12914)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001025432.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000012725 CGCGAATGACAACACAGATTT pLKO.1 250 CDS 100% 13.200 18.480 N Crebbp n/a
2 TRCN0000012724 CGGAGTCATCTAGTCCATAAA pLKO.1 1979 CDS 100% 13.200 18.480 N Crebbp n/a
3 TRCN0000231205 GAGGATCATTAACGACTATAA pLKO_005 4723 CDS 100% 13.200 18.480 N Crebbp n/a
4 TRCN0000231202 CTGGCCATGCTGGACTAAATA pLKO_005 930 CDS 100% 15.000 12.000 N Crebbp n/a
5 TRCN0000231204 CCAACCTCAGACGACAATTTC pLKO_005 3952 CDS 100% 13.200 9.240 N Crebbp n/a
6 TRCN0000231201 TAACTCTGGCCATAGCTTAAT pLKO_005 751 CDS 100% 13.200 9.240 N Crebbp n/a
7 TRCN0000367481 TAACTCTGGCCATAGCTTAAT pLKO_005 751 CDS 100% 13.200 9.240 N CREBBP n/a
8 TRCN0000006486 GCTATCAGAATAGGTATCATT pLKO.1 3870 CDS 100% 5.625 3.938 N CREBBP n/a
9 TRCN0000012723 CCGGGAATGAAGTCAAGGTTT pLKO.1 4301 CDS 100% 4.950 3.465 N Crebbp n/a
10 TRCN0000012727 CCTCACAATCAACATCTCCTT pLKO.1 3396 CDS 100% 2.640 1.848 N Crebbp n/a
11 TRCN0000231203 TCCTAGGAATCCCAGATTATT pLKO_005 3540 CDS 100% 15.000 9.000 N Crebbp n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001025432.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.