Transcript: Mouse NM_001142960.1

Mus musculus BCLl2-like 15 (Bcl2l15), transcript variant 2, mRNA.

Source:
NCBI, updated 2017-05-21
Taxon:
Mus musculus (mouse)
Gene:
Bcl2l15 (229672)
Length:
1993
CDS:
137..634

Additional Resources:

NCBI RefSeq record:
NM_001142960.1
NBCI Gene record:
Bcl2l15 (229672)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001142960.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000294519 TGCACTCAGGATCCTACTTTA pLKO_005 446 CDS 100% 13.200 10.560 N Bcl2l15 n/a
2 TRCN0000009727 GCAAACAGAATGCATCGTGAA pLKO.1 172 CDS 100% 4.050 3.240 N Bcl2l15 n/a
3 TRCN0000294584 GCAAACAGAATGCATCGTGAA pLKO_005 172 CDS 100% 4.050 3.240 N Bcl2l15 n/a
4 TRCN0000009724 GCCAATAATATCATTGCGGTA pLKO.1 359 CDS 100% 2.160 1.728 N Bcl2l15 n/a
5 TRCN0000294585 ACACAGCCATCCGCGAGTTTA pLKO_005 582 CDS 100% 13.200 9.240 N Bcl2l15 n/a
6 TRCN0000009728 GCTGGAAGCTTCTGCCAATAA pLKO.1 346 CDS 100% 13.200 9.240 N Bcl2l15 n/a
7 TRCN0000294518 GCTGGAAGCTTCTGCCAATAA pLKO_005 346 CDS 100% 13.200 9.240 N Bcl2l15 n/a
8 TRCN0000009725 GCTCAGGAGAGGATTACTCTT pLKO.1 267 CDS 100% 4.950 3.465 N Bcl2l15 n/a
9 TRCN0000294583 GCTCAGGAGAGGATTACTCTT pLKO_005 267 CDS 100% 4.950 3.465 N Bcl2l15 n/a
10 TRCN0000009726 TCTTGAATATGTGGTCCGTAA pLKO.1 505 CDS 100% 4.050 2.835 N Bcl2l15 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001142960.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.