Transcript: Mouse NM_001146000.1

Mus musculus zinc finger protein 710 (Zfp710), transcript variant 3, mRNA.

Source:
NCBI, updated 2017-05-21
Taxon:
Mus musculus (mouse)
Gene:
Zfp710 (209225)
Length:
4584
CDS:
202..2139

Additional Resources:

NCBI RefSeq record:
NM_001146000.1
NBCI Gene record:
Zfp710 (209225)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001146000.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000095351 CCCTCTGAACTTGACAACCAT pLKO.1 2160 3UTR 100% 3.000 4.200 N Zfp710 n/a
2 TRCN0000095353 GTCCTACACATCTAAGTATAA pLKO.1 1113 CDS 100% 13.200 9.240 N Zfp710 n/a
3 TRCN0000095352 GAAGTCCTACACATCTAAGTA pLKO.1 1110 CDS 100% 5.625 3.938 N Zfp710 n/a
4 TRCN0000095350 CCACATGCTCAAGCATCAGAA pLKO.1 1563 CDS 100% 4.950 3.465 N Zfp710 n/a
5 TRCN0000095349 CGTTTGAAAGAATGTCCCTAA pLKO.1 2957 3UTR 100% 4.050 2.835 N Zfp710 n/a
6 TRCN0000138949 GAAGTCCTTCAACCGCATGTA pLKO.1 1866 CDS 100% 4.950 2.970 N ZNF710 n/a
7 TRCN0000282020 GAAGTCCTTCAACCGCATGTA pLKO_005 1866 CDS 100% 4.950 2.970 N ZNF710 n/a
8 TRCN0000136453 CTCAAGACCCACATGATTGTA pLKO.1 1807 CDS 100% 5.625 3.938 N ZNF710 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001146000.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.