Transcript: Mouse NM_001162940.1

Mus musculus olfactory receptor 715B (Olfr715b), mRNA.

Source:
NCBI, updated 2017-05-17
Taxon:
Mus musculus (mouse)
Gene:
Olfr715b (384732)
Length:
948
CDS:
1..948

Additional Resources:

NCBI RefSeq record:
NM_001162940.1
NBCI Gene record:
Olfr715b (384732)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001162940.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000346178 ACTGTACTTGGAAACCTATTT pLKO_005 112 CDS 100% 13.200 7.920 N Olfr715b n/a
2 TRCN0000346119 CTTATACCTGTCTCCCTAATT pLKO_005 622 CDS 100% 13.200 6.600 Y Olfr715b n/a
3 TRCN0000346117 GGCTTCACACACCCATGTATT pLKO_005 161 CDS 100% 13.200 6.600 Y Olfr715b n/a
4 TRCN0000353270 TATCGAGGCAGCAACAGTATT pLKO_005 502 CDS 100% 13.200 6.600 Y Olfr715b n/a
5 TRCN0000346118 TCTTATTTCTGGGCATCTATA pLKO_005 86 CDS 100% 13.200 6.600 Y Olfr715b n/a
6 TRCN0000203034 GTAACTGTTGTCAAGATGAAA pLKO.1 667 CDS 100% 5.625 2.813 Y Olfr715 n/a
7 TRCN0000189033 GCTCTCATCCATCTCCTTTCA pLKO.1 241 CDS 100% 4.950 2.475 Y Olfr715 n/a
8 TRCN0000186186 CAGCAACAGTATTGCTCACTT pLKO.1 510 CDS 100% 0.495 0.248 Y Olfr715 n/a
9 TRCN0000185929 CCCTTTACATTACTCTAGCAT pLKO.1 384 CDS 100% 3.000 1.500 Y Olfr715 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001162940.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.