Transcript: Human NM_001164757.2

Homo sapiens nitric oxide synthase 1 adaptor protein (NOS1AP), transcript variant 3, mRNA.

Source:
NCBI, updated 2019-09-28
Taxon:
Homo sapiens (human)
Gene:
NOS1AP (9722)
Length:
5001
CDS:
488..1993

Additional Resources:

NCBI RefSeq record:
NM_001164757.2
NBCI Gene record:
NOS1AP (9722)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001164757.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000045624 CGGATACGGTATGAGTTTAAA pLKO.1 656 CDS 100% 15.000 21.000 N NOS1AP n/a
2 TRCN0000439290 CCGAGGTGTGACTGATCTAGA pLKO_005 1174 CDS 100% 4.950 6.930 N NOS1AP n/a
3 TRCN0000045627 GCCAGCAATATCTTCAGGTGT pLKO.1 881 CDS 100% 2.640 3.696 N NOS1AP n/a
4 TRCN0000412968 ACTTGAAGATCTTCAGCTATA pLKO_005 846 CDS 100% 10.800 7.560 N NOS1AP n/a
5 TRCN0000430282 ATTCTGCTTTGGAGGGTAAAG pLKO_005 2144 3UTR 100% 10.800 7.560 N NOS1AP n/a
6 TRCN0000429381 TGGATGGAGTGAAAGTGATTC pLKO_005 720 CDS 100% 10.800 7.560 N NOS1AP n/a
7 TRCN0000045623 CCCATCTACAGGATCTTCTAT pLKO.1 806 CDS 100% 5.625 3.938 N NOS1AP n/a
8 TRCN0000045625 CTGGAGTGCTTTCGCTTTCTT pLKO.1 1754 CDS 100% 5.625 3.938 N NOS1AP n/a
9 TRCN0000434603 TACTTTGTTTCTGGATATCAC pLKO_005 2422 3UTR 100% 4.950 3.465 N NOS1AP n/a
10 TRCN0000045626 GCTCCCTTCTTCTTCCTCGAA pLKO.1 1282 CDS 100% 2.640 1.848 N NOS1AP n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001164757.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.