Transcript: Mouse NM_001291891.1

Mus musculus a disintegrin and metallopeptidase domain 19 (meltrin beta) (Adam19), transcript variant 3, mRNA.

Source:
NCBI, updated 2017-06-04
Taxon:
Mus musculus (mouse)
Gene:
Adam19 (11492)
Length:
6421
CDS:
1092..2903

Additional Resources:

NCBI RefSeq record:
NM_001291891.1
NBCI Gene record:
Adam19 (11492)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001291891.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000415916 GAATCCAACGCAGTATCTATT pLKO_005 1899 CDS 100% 13.200 18.480 N Adam19 n/a
2 TRCN0000436009 GCGACAGCCAACACCGTATTT pLKO_005 597 5UTR 100% 13.200 18.480 N Adam19 n/a
3 TRCN0000031896 CGCTACAGCATGAACTCATAA pLKO.1 252 5UTR 100% 13.200 10.560 N Adam19 n/a
4 TRCN0000413271 GGAATTAGAGGACTGATTATA pLKO_005 533 5UTR 100% 15.000 10.500 N Adam19 n/a
5 TRCN0000438272 GTGTGGCCACAACCATATTTG pLKO_005 2045 CDS 100% 13.200 9.240 N Adam19 n/a
6 TRCN0000031894 CCTCCTTATTTCTGACTCATA pLKO.1 3963 3UTR 100% 4.950 3.465 N Adam19 n/a
7 TRCN0000031895 CGCAGAATGAAACGGGAAGAT pLKO.1 728 5UTR 100% 4.950 3.465 N Adam19 n/a
8 TRCN0000031898 GCCATGACAATGCTCAGCTAA pLKO.1 1024 5UTR 100% 4.950 3.465 N Adam19 n/a
9 TRCN0000031897 GCATCAGTTCAGTTGTCCCTT pLKO.1 2375 CDS 100% 2.640 1.848 N Adam19 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001291891.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.