Transcript: Human NM_001370526.1

Homo sapiens unk like zinc finger (UNKL), transcript variant 9, mRNA.

Source:
NCBI, updated 2019-06-09
Taxon:
Homo sapiens (human)
Gene:
UNKL (64718)
Length:
4091
CDS:
360..995

Additional Resources:

NCBI RefSeq record:
NM_001370526.1
NBCI Gene record:
UNKL (64718)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001370526.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000033914 CTCTTCGAGTGCAAGTCCAAA pLKO.1 533 CDS 100% 4.950 6.930 N UNKL n/a
2 TRCN0000033915 CCCGGGAGCATCTGGGACTTT pLKO.1 456 CDS 100% 0.000 0.000 N UNKL n/a
3 TRCN0000033918 CCTGCCGAAGCTGCACTCGCT pLKO.1 842 CDS 100% 0.000 0.000 N UNKL n/a
4 TRCN0000033917 CCTGTCAGCACCACATCCTCT pLKO.1 971 CDS 100% 0.880 0.528 N UNKL n/a
5 TRCN0000138772 GCAGGAGAATCGCTTGAACTT pLKO.1 2189 3UTR 100% 4.950 2.475 Y DCAF11 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001370526.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.