Transcript: Mouse NM_007781.3

Mus musculus colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) (Csf2rb2), transcript variant 1, mRNA.

Source:
NCBI, updated 2017-06-03
Taxon:
Mus musculus (mouse)
Gene:
Csf2rb2 (12984)
Length:
4740
CDS:
294..2930

Additional Resources:

NCBI RefSeq record:
NM_007781.3
NBCI Gene record:
Csf2rb2 (12984)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_007781.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000067073 CCAAATACATTGATCACACTT pLKO.1 1396 CDS 100% 4.950 6.930 N Csf2rb2 n/a
2 TRCN0000067075 ACCAGCTAGACAAGATTCAAT pLKO.1 496 CDS 100% 5.625 3.938 N Csf2rb2 n/a
3 TRCN0000067074 GCTCTCCACTTTGGCCGTGTT pLKO.1 1674 CDS 100% 1.350 0.945 N Csf2rb2 n/a
4 TRCN0000067076 GCGTGGAGAAACAGGAGGCAA pLKO.1 2335 CDS 100% 0.880 0.616 N Csf2rb2 n/a
5 TRCN0000067077 GAGGTGACAGAGGAAGAAGAA pLKO.1 363 CDS 100% 4.950 2.970 N Csf2rb2 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_007781.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.