Transcript: Mouse NM_008652.2

Mus musculus myeloblastosis oncogene-like 2 (Mybl2), mRNA.

Source:
NCBI, updated 2017-06-25
Taxon:
Mus musculus (mouse)
Gene:
Mybl2 (17865)
Length:
3702
CDS:
195..2309

Additional Resources:

NCBI RefSeq record:
NM_008652.2
NBCI Gene record:
Mybl2 (17865)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_008652.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000042510 GCTCTCGACATTATGGATGAA pLKO.1 1965 CDS 100% 4.950 6.930 N Mybl2 n/a
2 TRCN0000042508 CCAGAATCTCTCAAGCGTGAA pLKO.1 1005 CDS 100% 4.050 5.670 N Mybl2 n/a
3 TRCN0000333992 CCAGAATCTCTCAAGCGTGAA pLKO_005 1005 CDS 100% 4.050 5.670 N Mybl2 n/a
4 TRCN0000042512 TCTGCTAAAGAACTCGGACAT pLKO.1 939 CDS 100% 4.050 5.670 N Mybl2 n/a
5 TRCN0000333991 TCTGCTAAAGAACTCGGACAT pLKO_005 939 CDS 100% 4.050 5.670 N Mybl2 n/a
6 TRCN0000347995 AGCTCCCAAGAACTATGTATG pLKO_005 2794 3UTR 100% 10.800 7.560 N Mybl2 n/a
7 TRCN0000042511 GAGACAACAGATGTAAGGTTA pLKO.1 271 CDS 100% 4.950 3.465 N Mybl2 n/a
8 TRCN0000333990 GAGACAACAGATGTAAGGTTA pLKO_005 271 CDS 100% 4.950 3.465 N Mybl2 n/a
9 TRCN0000042509 GTCAAGAAGTATGGCACCAAA pLKO.1 486 CDS 100% 4.950 3.465 N Mybl2 n/a
10 TRCN0000020521 CCCAGATCAGAAGTACTCCAT pLKO.1 1721 CDS 100% 2.640 1.848 N MYBL2 n/a
11 TRCN0000278025 CCCAGATCAGAAGTACTCCAT pLKO_005 1721 CDS 100% 2.640 1.848 N MYBL2 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_008652.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.