Transcript: Human NM_012250.6

Homo sapiens RAS related 2 (RRAS2), transcript variant 1, mRNA.

Source:
NCBI, updated 2019-06-08
Taxon:
Homo sapiens (human)
Gene:
RRAS2 (22800)
Length:
2343
CDS:
314..928

Additional Resources:

NCBI RefSeq record:
NM_012250.6
NBCI Gene record:
RRAS2 (22800)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_012250.6, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000047724 CGTGATGAGTTCCCAATGATT pLKO.1 662 CDS 100% 5.625 4.500 N RRAS2 n/a
2 TRCN0000299286 CGTGATGAGTTCCCAATGATT pLKO_005 662 CDS 100% 5.625 4.500 N RRAS2 n/a
3 TRCN0000047725 CCATTGAAGATTCTTACACAA pLKO.1 450 CDS 100% 4.950 3.960 N RRAS2 n/a
4 TRCN0000299358 CCATTGAAGATTCTTACACAA pLKO_005 450 CDS 100% 4.950 3.960 N RRAS2 n/a
5 TRCN0000047723 CCATGAACTTGTCCGGGTTAT pLKO.1 817 CDS 100% 10.800 7.560 N RRAS2 n/a
6 TRCN0000331646 CCATGAACTTGTCCGGGTTAT pLKO_005 817 CDS 100% 10.800 7.560 N RRAS2 n/a
7 TRCN0000047726 GCAAAGATTAGGATGAATGTA pLKO.1 785 CDS 100% 5.625 3.938 N RRAS2 n/a
8 TRCN0000299285 GCAAAGATTAGGATGAATGTA pLKO_005 785 CDS 100% 5.625 3.938 N RRAS2 n/a
9 TRCN0000047727 CTCAGAGTAAAGGATCGTGAT pLKO.1 647 CDS 100% 4.050 2.835 N RRAS2 n/a
10 TRCN0000299287 CTCAGAGTAAAGGATCGTGAT pLKO_005 647 CDS 100% 4.050 2.835 N RRAS2 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_012250.6, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.