Transcript: Human NR_015407.1

Homo sapiens long intergenic non-protein coding RNA 1139 (LINC01139), long non-coding RNA.

Source:
NCBI, updated 2019-07-02
Taxon:
Homo sapiens (human)
Gene:
LINC01139 (339535)
Length:
1540
CDS:
(non-coding)

Additional Resources:

NCBI RefSeq record:
NR_015407.1
NBCI Gene record:
LINC01139 (339535)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the exonic sequence of this non-coding transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NR_015407.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

No results found.

shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NR_015407.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 ccsbBroadEn_10615 pDONR223 100% 26.8% None 1_317del;570C>T;732_1540del n/a
2 ccsbBroad304_10615 pLX_304 0% 26.8% V5 1_317del;570C>T;732_1540del n/a
3 TRCN0000471402 TGACAGTGGCCAGGCGACCCGCCG pLX_317 92.2% 26.8% V5 1_317del;570C>T;732_1540del n/a
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