Nucleotide Global Alignment

Description

Query:
TRCN0000469079
Subject:
NM_001039211.3
Aligned Length:
1763
Identities:
1160
Gaps:
535

Alignment

Query    1  ATGTCGTGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGACGCGGGGCCGCCGCCGCCTTTGCCGCCCGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGCTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATG-CCAAGGACGC  221
                                                                        ||| |.||||||||
Sbjct    1  ------------------------------------------------------------ATGTCAAAGGACGC  14

Query  222  CCTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCG  295
            ||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct   15  CCTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAA-------------  75

Query  296  CCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACC  369
                                                                                      
Sbjct   76  --------------------------------------------------------------------------  75

Query  370  CGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCA  443
                                                                                      
Sbjct   76  --------------------------------------------------------------------------  75

Query  444  GCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCA  517
             ||||||.|||||||||   ||||||||||||||||||||||||||||||                        
Sbjct   76  -CAACTTGTCAATGAGG---ATTTACGGAAGCAGGAGGAGTCCGTGCAGA------------------------  121

Query  518  CCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCGCGCC  591
                                                                                      
Sbjct  122  --------------------------------------------------------------------------  121

Query  592  AAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGACCGT  665
                                                                      ||||||.|||||||.|
Sbjct  122  ----------------------------------------------------------AGCACCATCAGACCTT  137

Query  666  CTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAG  739
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  138  CTTGGAGTCCATCAGGGCGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAG  211

Query  740  TGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCAC-GCTTGTCGC  812
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|| || .|||.|
Sbjct  212  TGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGC-CGTCAC  284

Query  813  CGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGG  886
            .|||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  285  TGGCCGCTACATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGG  358

Query  887  CGCTGCGGCACCCCATC---CAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGTG  957
            |||||||||||||||||   |||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  359  CGCTGCGGCACCCCATCCAGCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTG  432

Query  958  CTCAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCT  1031
            ||.|||||||||||||||||||||||||||||||||||||||...||||||||||.||||||||||||..||||
Sbjct  433  CTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAATGACAAGGAACATCAAGAAGAACCGGGGCCT  506

Query 1032  GTACAGGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACT  1105
            |||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  507  GTACAGGCACATCCTGCTGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACT  580

Query 1106  CAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCAC  1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  581  CAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCAC  654

Query 1180  AAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCG  1253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  655  AAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCG  728

Query 1254  GAAGCGAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGC  1327
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  729  GAAGCGAGCCACTGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGC  802

Query 1328  ACAGCAACAAGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATC  1401
            ||||||||||.|||||||||.|||||||||||..|||.||.|||||||||||||||||||||||||.|.|||||
Sbjct  803  ACAGCAACAAATTCATGCTGATCCTGGCCAGCTGCCACCCCGAGCAGTTCGACTGGGCCATCAATGCCTGCATC  876

Query 1402  AATGAGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATTTTGACAAGTA  1475
            .|.|.|||||||||||||||||||||||||||||||||.||||.|||||||||||||||||||.||.||.||||
Sbjct  877  GACGTGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAGCGGGCGCGCCTGGTGAGAATGTATCTTAACGAGTA  950

Query 1476  TGTTCTTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGG  1549
            |||||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||..|
Sbjct  951  TGTTCTTAAGCCGGCCACAGAAGGAAAGCGGCGTCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTTAG  1024

Query 1550  AGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCG  1623
            ||.|||||||||||||.|||||||||||..|||||.|||||||.||||||||||||||||||||||||||||||
Sbjct 1025  AGATCGCTCGGCTGACAGAGGGCATGTCATGCCGGAAGATCGCACAGCTGGCCGTGTCCTGGCAGGCCACGGCG  1098

Query 1624  TATGCCTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCAGCAGCACCA  1697
            |||||||||.||||||||||||||||||||||||||||||||.||.||||||||||...|||||||||||||||
Sbjct 1099  TATGCCTCCAAGGACGGGGTCCTGACCGAGGCCATGATGGACGCCTGCGTGCAAGACTTTGTCCAGCAGCACCA  1172

Query 1698  GCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC  1758
            |||||.||||.||||||||||||.|||..|||||||||..|.||||||||...||.|||||
Sbjct 1173  GCAGATGATGCGCTGGCTGAAGGGGGAGAGGCCTGGGCCCGAGGACGAGCAACCCTCATCC  1233

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