Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_135913.2
- Aligned Length:
- 4053
- Identities:
- 242
- Gaps:
- 3779
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT 592
Query 1 -----------------------------------------------------------------------ATG 3
|
Sbjct 593 AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAA-- 664
Query 4 GAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTT 77
||||.||||||||||.||||||||||||||||..|||||||||||..|.|||||||.||||.||.|.||.||||
Sbjct 665 GAGTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTT 738
Query 78 CAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG-GTGCCCACCACCACAGCTGGCTAATTTT 150
|||||.|||||||||.|||||||.||||||||||||||||||||| ||| |||||||||..|.||||||||||
Sbjct 739 CAAGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGCGTG--CACCACCACGCCAGGCTAATTTT 810
Query 151 TGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
||||||.|||||||||||.|||||||.||||.||||||||.|||||||||||||||||||||||||||.|||||
Sbjct 811 TGTATTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGC 884
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT---------------- 282
|.||||.|||.||.||||||||||.|||||.|||.|||||||||||||||.|| |
Sbjct 885 CCGCCTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGG----TAGTAAACGTGTTTCTT 954
Query 283 -------------------------------------------------------------------------- 282
Sbjct 955 TAAGAATATACTAACAAACTGCAAGGTGATGCGGTCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGA 1028
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1029 CTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAAT 1102
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1103 GGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAG 1176
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1177 AAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGGATGTGAAGAGCTGGC 1250
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1251 AAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGA 1324
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1325 AGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCA 1398
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1399 CAATTAAAGTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAAT 1472
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1473 TAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACT 1546
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1547 CTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAG 1620
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1621 GACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACG 1694
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1695 AAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCA 1768
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1769 ACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAG 1842
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1843 TTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTG 1916
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1917 GTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCAC 1990
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1991 ATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACA 2064
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2065 CACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAG 2138
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2139 TGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGT 2212
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2213 AGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACT 2286
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2287 CTTACTTTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATT 2360
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2361 TACCTATAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAA 2434
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2435 ATACTGTCTACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTG 2508
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2509 GTCAAGCTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCC 2582
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2583 ATTTTCCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAG 2656
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2657 ACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTA 2730
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2731 GTGGCTTCATGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCAC 2804
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2805 TTAGTACAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTC 2878
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2879 CCTTTCTCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTT 2952
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2953 TTCTTCACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCT 3026
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3027 TCTTTATCTAGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGAT 3100
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3101 ATAGCAACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCC 3174
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3175 CCCTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGT 3248
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3249 TCAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTA 3322
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3323 TTAAACAGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATAT 3396
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3397 GATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAG 3470
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3471 AAGGGAGAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGA 3544
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3545 AGCTGAAGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCT 3618
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3619 CTATTTATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAG 3692
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3693 GCCTGCGGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTC 3766
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3767 TGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGG 3840
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3841 AACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAA 3914
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3915 CTCAACCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAA 3988
Query 283 --------------------------------------------------------- 282
Sbjct 3989 AATTATACTTTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA 4045
