Nucleotide Global Alignment
Description
- Query:
- TRCN0000470199
- Subject:
- XM_006510786.1
- Aligned Length:
- 1187
- Identities:
- 881
- Gaps:
- 175
Alignment
Query 1 ATGGCGGTTGTAGCGGCGGCTGC-----CGGCT-GGCTACTCAGGCTCAGGGCGGCAGGGGCTGAGGGGCACTG 68
|||||| ||||.|||||| |||.| ||||.||..|||||.||||.||.||.||.|||.||| |
Sbjct 1 ATGGCG------GCGGTGGCTGCGCGCGCGGGTGGGCTGCTGTGGCTCCGGGCTGCGGGAGCAGAGCGGC---G 65
Query 69 GCG--TCGG-CTTC-CTGGCGCGGGGCTGGCGCGGGGCTTTTTGCACCCCGCCGCGACTGTCGAGGATGCGGCC 138
||| .||| ||.| || ||||.|.|||||.||..|||||..||||.|||| ..|.||||||..|||||
Sbjct 66 GCGGTGCGGACTGCGCT-GCGCTGCGCTGGTGCAAGGCTTCCTGCAACCCG------GGGGCGAGGACACGGCC 132
Query 139 CAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAGTACGGGCAAACTCAGAAAAT 212
||||.|||||.||||||.||.||.||||||| |||||||.||
Sbjct 133 CAGAAGCGGCGGGTGGCCCACTTCACTTTCC------ATCCGGACCC--------------------------- 173
Query 213 GAATCTTTTCCAGTCTGTAACAAGTGCCTTGGATAACTCATTGGCCAAAGA-TCCTACTGCAGTAATATTTGGT 285
||| ||| ||||||
Sbjct 174 ------------------------------------------------AGAGTCC--CTGCAG----------- 186
Query 286 GAAGATGTTGCCTTTGGTGGAGTCTTTAGATGCACTGTTGGCTTGCGAGACAAATATGGAAAAGATAGAGTTTT 359
|||||||||||||||||.||
Sbjct 187 ------------------------------------------------------TATGGAAAAGATAGAGTGTT 206
Query 360 TAATACCCCATTGTGTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTCACTGGAGCTACTGCCATTG 433
|||.|||||.|||||||||||||||||.|||||||||||.||.|||||.||||||||.||.|||||.||.||||
Sbjct 207 TAACACCCCGTTGTGTGAACAAGGAATAGTTGGATTTGGCATTGGAATCGCGGTCACCGGTGCTACAGCTATTG 280
Query 434 CGGAAATTCAGTTTGCAGATTATATTTTCCCTGCATTTGATCAGATTGTTAATGAAGCTGCCAAGTATCGCTAT 507
|||||||.||||||||.||.||||||||||||||.||||||||||||||.||.||||||||||||||||||||.
Sbjct 281 CGGAAATCCAGTTTGCCGACTATATTTTCCCTGCCTTTGATCAGATTGTCAACGAAGCTGCCAAGTATCGCTAC 354
Query 508 CGCTCTGGGGATCTTTTTAACTGTGGAAGCCTCACTATCCGGTCCCCTTGGGGCTGTGTTGGTCATGGGGCTCT 581
|||||.||.||||||||.||||||||.||||||||.||||||.||||.|||||.|||||.||.|||||||||||
Sbjct 355 CGCTCAGGTGATCTTTTCAACTGTGGGAGCCTCACCATCCGGGCCCCGTGGGGTTGTGTGGGCCATGGGGCTCT 428
Query 582 CTATCATTCTCAGAGTCCTGAAGCATTTTTTGCCCATTGCCCAGGAATCAAGGTGGTTATACCCAGAAGCCCTT 655
|||.||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||.|||||||||
Sbjct 429 CTACCATTCTCAGAGTCCTGAAGCCTTTTTTGCCCATTGCCCAGGGATCAAGGTGGTAATACCCCGAAGCCCTT 502
Query 656 TCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAAATCCTTGTATATTTTTTGAACCTAAAATACTT 729
||||||||||.||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||
Sbjct 503 TCCAGGCCAAGGGACTTCTGTTGTCATGCATAGAAGATAAAAATCCATGTATATTTTTTGAACCTAAAATACTT 576
Query 730 TACAGGGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGA 803
|||.|||||||||.||||.|.|||||..|||||||.|||||.|||||..||||.|||||.||||||||.|||||
Sbjct 577 TACCGGGCAGCAGTGGAACAGGTCCCAGTAGAACCCTACAAGATCCCCTTGTCTCAGGCTGAAGTCATCCAGGA 650
Query 804 AGGGAGTGATGTTACTCTAGTTGCCTGGGGCACTCAGGTTCATGTGATCCGAGAGGTAGCTTCCATGGCAAAAG 877
.||.||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||||.|||||||||||..|||
Sbjct 651 GGGCAGCGATGTGACTCTGGTTGCCTGGGGCACTCAGGTTCATGTCATCCGGGAGGTGGCTTCCATGGCCCAAG 724
Query 878 AAAAGCTTGGAGTGTCTTGTGAAGTCATTGATCTGAGGACTATAATACCTTGGGATGTGGACACAATTTGTAAG 951
|||||||||||||.||||||||||||||.||||||.||||.||..|.||||||||||||||.|||.||||.|||
Sbjct 725 AAAAGCTTGGAGTATCTTGTGAAGTCATCGATCTGCGGACAATTGTGCCTTGGGATGTGGATACAGTTTGCAAG 798
Query 952 TCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAATCAG 1025
||||||||||||||.|||||||||.|.|||||.||||||||||||||.||||||||||||||.||.||.|||||
Sbjct 799 TCTGTGATCAAAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCTTAACAGGCGGCTTTGCCTCTGAGATCAG 872
Query 1026 CTCTACAGTTCAGGAGGAATGTTTCTTGAACCTAGAGGCTCCTATATCAAGAGTATGTGGTTATGACACACCAT 1099
|||.||.||.|||||.||||||||||||||||||||||||||.|||||..||||.||.||.||||||||.||.|
Sbjct 873 CTCCACGGTCCAGGAAGAATGTTTCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCGGATATGACACCCCGT 946
Query 1100 TTCCTCACATTTTTGAACCATTCTACATCCCAGACAAATGGAAGTGTTATGATGCCCTTCGAAAAATGATCAAC 1173
||||||||||.|||||.||.||.||.||||||||||||||||||||.||.|||||||||||.||.|||||||||
Sbjct 947 TTCCTCACATCTTTGAGCCCTTTTATATCCCAGACAAATGGAAGTGCTACGATGCCCTTCGCAAGATGATCAAC 1020
Query 1174 TAT 1176
|||
Sbjct 1021 TAT 1023