Nucleotide Global Alignment
Description
- Query:
- TRCN0000475456
- Subject:
- XR_001782069.1
- Aligned Length:
- 2839
- Identities:
- 1144
- Gaps:
- 1525
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGGACTAAGAGACTAAGACGAGATCTCAAACGTTATTTCGTTCTTCTGGTGTCAAGCCCCTCTCACGGATTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAAATTGTCTTTTTCCAGGCTTCCGCCAGGGGATGGACTACAACTCCCATGATACTCGTGTGCCGCTCCTTATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAGGCTTCGCTTCTCTCCCTGGCCGCTCAGGGGACGACTACAGTACCCAGAATGCCCTGCTCCCTCGCTTGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTTTTTGCCCCTCTCTTGGCGTTGAACGCGGTAGTGGCTGTCCGGAGTGCCAGGCCTGGGGTTCTCGGTGTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCCCCCGGTCACGGGCGAGGAGGCGACTTGACTTCTGGGCGCCGAGCCCGGGCGCGCGCGCAAGCGGCTGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCCGCTGCAGGTTCGCGTCCCGCTTTGCTCCTCGCGCATCTCGGCTCGGCGGCAGCCCGGACGGCCCGGGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGACGGCCCCAGGACAGGGGTGACCGTCGCGGCTGCGGGAGCAGAGGCGAAGCTGAGGCCCGGGGAGAGGCGAC 518
Query 1 --------------------------------------ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATC 36
||||||||||||.|.|||||.|||||||||||||||
Sbjct 519 AGCGGCGAGAGCACCCGGGGAGAGGAGGAGGAGAGAAGATGGCGTCGGAGATGGAGCCCGAGGTGCAGGCCATC 592
Query 37 GACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGCGGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGA 110
|||||.||.||||||||||||||.|||||.|||||.||.||||.|||||||||||||||.|||||||..|||||
Sbjct 593 GACCGCAGTTTGCTGGAATGTTCTGCCGAAGAGATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAACAGAGA 666
Query 111 AGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAG 184
|||||||||||||||||||||||.|||.|||||||||||||||.||||.||.|||||.||.||.|||||.||||
Sbjct 667 AGTGTACCAGCATTTAGCCCACTGTGTGCCCAAAATCTACTGCCGGGGCCCTAACCCCTTCCCTCAGAAGGAAG 740
Query 185 ACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTT 258
|||.||||||||||||..|..||.|||||||.|||||.||||||.|.||.|.||||||.|||||..|.||||||
Sbjct 741 ACACGCTGGCACAGCACATCCTGCTGGGACCGATGGAGTGGTACATCTGCGCTGAAGACCCTGCGCTGGGATTT 814
Query 259 CCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTC 332
|||||.||.|||||.||||||||.||||||||.||.|||||.||.||.||||||||.||.||.||||||||.||
Sbjct 815 CCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGTGTTTAAAGTGGGGGAACCTACATACTC 888
Query 333 TTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATC 406
.||||||||||||||||||||.||.||.||||||||.||||||||||||||..||||||||||.||.|||||.|
Sbjct 889 CTGCAGAGACTGTGCAGTTGACCCCACCTGTGTTTTATGCATGGAGTGCTTCCTGGGAAGTATCCATAGAGACC 962
Query 407 ATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGT 480
||||||||||||||||.|||||.|||||.||.||.|||||||||||||||||.|||||.||.|||||||||||.
Sbjct 963 ATCGATATAGGATGACCACATCGGGAGGAGGGGGCTTCTGTGACTGTGGTGACACTGAGGCGTGGAAAGAGGGA 1036
Query 481 CCTTACTGTCAAAAACATGAACTTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGA 554
||||||||.||.||.||..|.||.|.||.|||||||.|||.|||.||.||||||||||||||.|||.|||||||
Sbjct 1037 CCTTACTGCCAGAAGCACAAGCTCAGCAGCTCTGAAGTTGTGGAGGAGGAGGATCCTCTTGTGCATCTATCAGA 1110
Query 555 AGATGTGATAGCAAGAACTTATAACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAA 628
|||||||||.||.||||||||.||||||||||||||||.||||||.|||||||||||.|||.|.||||||||||
Sbjct 1111 AGATGTGATCGCCAGAACTTACAACATTTTTGCTATTATGTTTCGATATGCAGTAGATATACTGACCTGGGAAA 1184
Query 629 AAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGAT 702
||||||||||||||||.|.|||.|||||..|||.|||||||||||||||||||||.||||||||||||||||||
Sbjct 1185 AAGAAAGTGAATTGCCTGAAGACTTAGAAGTGGCAGAGAAGAGTGACACCTACTACTGCATGCTGTTTAATGAT 1258
Query 703 GAGGTTCACACCTACGAACAAGTTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGG 776
||||||||||||||.||.|||||.||||||||.||||||||||||||.|||||||||||.||.|||||.|||||
Sbjct 1259 GAGGTTCACACCTATGAGCAAGTCATTTATACCCTTCAGAAAGCTGTGAACTGTACACAGAAGGAAGCCATTGG 1332
Query 777 TTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAA 850
.||||||||||||||.|||||||||||.|||||||||||.||||||||||||||.|||||.|||||.|||||||
Sbjct 1333 CTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTGTCCGATATGGAGATTTCCAGTACTGTGATCAAGCAA 1406
Query 851 AATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTC 924
|..||||.||||||||.||.|||||.||||||||.|||||.||||||||||||||||||||.||.||..|.|..
Sbjct 1407 AGACAGTCATTGTGAGGAACACCAGCAGACAGACCAAGCCGCTCAAAGTTCAAGTTATGCACTCCTCCGTGGCT 1480
Query 925 GCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCG 998
||.|||||||||||||||||||||..|.||||.||||||||||||.||||||||||.|||||||||||||||.|
Sbjct 1481 GCTCATCAGAATTTTGGTTTGAAAGCTCTGTCGTGGCTGGGAAGTGTTATTGGATACTCAGATGGCCTTCGCAG 1554
Query 999 GATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTA 1072
||||||.|||||||||||.|||||||||||.||||||||.||||||||||||||.||.||||||||||||||||
Sbjct 1555 GATTTTGTGTCAAGTTGGATTACAAGAAGGTCCAGATGGCGAAAACTCTTCTCTGGTCGACAGACTGATGCTTA 1628
Query 1073 GTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTG 1146
.|||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||.|||||.|||||..|.
Sbjct 1629 ATGATTCCAAATTATGGAAAGGGGCTAGGAGTGTGTATCACCAGTTGTTCATGAGCAGCCTGCTCATGGACCTC 1702
Query 1147 AAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAACTATGAGCGTTTGCAGAGTGATTATGTGACAGATGA 1220
||.||.|||||.||.||.||..||||||||||.|||||||||||||||||||||||.|||||||||||||||||
Sbjct 1703 AAGTATAAGAAGCTGTTCGCGCTTCGATTTGCTAAAAACTATGAGCGTTTGCAGAGAGATTATGTGACAGATGA 1776
Query 1221 CCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACGGTTCCTTCACTT-------TTCTCT 1287
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||| |.|||
Sbjct 1777 CCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACAGTTCCTTCACTTGCGCGAATGCTC- 1849
Query 1288 ATCT-------------CTGCTGGGCG----CAGT--GGC--TCA-----CCTCTG------------------ 1317
|| |||.||..|| ||.| ||| ||| |.|.||
Sbjct 1850 --CTCACAGAAGAGAACCTGATGACCGTTATCATTAAGGCTTTCATGGACCATTTGAAACACAGAGATGCCCAG 1921
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1922 GGCAGATTCCAGTTTGAACGCTACACTGCCCTCCAAGCCTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGA 1995
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1996 TCTCAAGTATGTATTGATTAGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGGGTTCG 2069
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2070 ATGCCTTCTTGGAATTACTGAAGTGCATGCAGGGAATGGACCCGATCACGCGTCAGGTGGGACAGCACATTGAG 2143
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2144 ATGGAGCCAGAGTGGGAAGCAGCCTTCACACTGCAGATGAAGCTGACACACGTCATCTCAATGGTGCAGGACTG 2217
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2218 GTGTGCTCTGGACGAAAAAGTGTTAATTGAAGCTTACAAGAAATGCCTGGCTGTGCTGACACAGTGTCATGGCG 2291
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2292 GATTTACTGATGGTGAACAGCCAATCACACTCAGTATTTGTGGACACTCGGTGGAAACCATCAGATACTGTGTT 2365
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2366 TCCCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAAAAG 2439
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2440 TGAAGTGGCATATAAATTTCCAGAGCTCCTACCTCTAAGTGAACTGAGCCCACCCATGTTGATAGAACATCCTC 2513
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2514 TTAGATGTCTTGTCTTATGTGCTCAAGTGCATGCTGGGATGTGGAGAAGAAATGGCTTCTCTCTAGTAAATCAG 2587
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2588 ATCTATTACTACCATAATGTGAAATGCAGGCGAGAGATGTTCGACAAGGACATAGTGATGCTTCAGGTGTCTCC 2661
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2662 ATGATGGACCCAAACCACTTCCTGATGATCATGCTCAGCCGCTTTGAACTCTATCAGCTCTTCAGCACGCCTGA 2735
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2736 CTATGGGAAGAGATTCAGTTCTGAGGTTACCCATAAGGACGTCGTTCAGCAGAACAACACTCTGATCGAAGAGA 2809
Query 1318 --------------------------- 1317
Sbjct 2810 TGCTCTACCTCATCATCATGCTTGTGG 2836
