Nucleotide Global Alignment

Description

• Query: TRCN0000478915
• Subject: NM_001205371.1
• Aligned Length: 1318
• Identities: 824
• Gaps: 389

Alignment

Query    1  ATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTGGTGGTGCTGCTGGTGGTGAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGTCGTCCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGGAGGTGGCCGAGCTGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGGGCCAGGTCCAGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGACCTCTTGCTGTTGGTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GACACGCACAAGAAACAGATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCGGCTGCAGGCCAGAGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGGCCTCGGGAAGAGATGCGAGGATGACAAGGTTAAACTACAGAACAACATATCGTATCAGATGGCAGACATAC  370
                                                                         |||||||||||||
Sbjct    1  -------------------------------------------------------------ATGGCAGACATAC  13

Query  371  ATCATTTAAAGGAGCAACTTGCTGAGCTTCGTCAGGAATTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGG  444
            |||||||||||||||||||.|||||||||||||||||.|||||||||||.|||||.||||||||.|||||.|||
Sbjct   14  ATCATTTAAAGGAGCAACTGGCTGAGCTTCGTCAGGAGTTTCTTCGACAGGAAGATCAGCTTCAAGACTACAGG  87

Query  445  AAGAACAATACTTACCTTGTGAAGAGGTTAGAATATGAAAGTTTTCAGTGTGGACAGCAGATGAAGGAATTGAG  518
            ||.||.|||||.||||||||.|||.||.|||||||.||.|||||||||||||||||||||||.|||||.||.||
Sbjct   88  AAAAATAATACCTACCTTGTCAAGCGGCTAGAATACGAGAGTTTTCAGTGTGGACAGCAGATCAAGGAGTTAAG  161

Query  519  AGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTTTTTAGAGGAACAAAAGCAAGAGACCCAAAAGA  592
            ||||||.||||||||||||||||||||.||||||||.||||||||..|||||||||||   |||||.||.||||
Sbjct  162  AGCACAACATGAAGAAAATATTAAAAAATTAGCAGATCAGTTTTTGCAGGAACAAAAG---GAGACTCATAAGA  232

Query  593  TTCAATCAAATGATGGAAAGGAATTGGATATAAACAATCAAGTAGTACCTAAAAATATTCCAAAAGTAGCTGAG  666
            |||||||||||||||||||.|||||||.||.||||.||||.|.||.||||||||||||||||||.||..||||.
Sbjct  233  TTCAATCAAATGATGGAAAAGAATTGGGTAGAAACGATCATGGAGCACCTAAAAATATTCCAAATGTGCCTGAA  306

Query  667  AATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAAGAACAAATCAAAAGAGGTGG  740
            ||||.||||.|||||||||||||.|||||||||||||||.||||.|||||||||||||||.|||||.|||.|||
Sbjct  307  AATGATGCAAATAAGAATGAAGACCCCTCAAGCAATCATCTTCCCCATGGGAAAGAACAACTCAAACGAGTTGG  380

Query  741  TGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCCCTGCTTTAAGGAAGC  814
            |||||||||||||||||||.|||||||||||||||||||||||||.||.||.|||||..|||||||||.|||||
Sbjct  381  TGATGCAGGGATGCCTGGAGTAGAAGAGAATGACCTAGCAAAAGTAGACGAGCTTCCTGCTGCTTTAAAGAAGC  454

Query  815  CTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTCTCTCCCCA  888
            |.|||.|.|.||.|||||||||||||||||||||..|||||||||||||||||||||||||.||||||||.|||
Sbjct  455  CCCCTGTGTTAGCTTCTCAACATGAAAGTCATCAGACAATCTCCCATCTTCCAACTGGACAGCCTCTCTCACCA  528

Query  889  AATATGCCTCCAGATTCACACATAAACCACAATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCTCT  962
            ||.|||.||||||.||||||..|||||||.||||.|||.|||.||||||||||||||||.|||||.|.||||||
Sbjct  529  AACATGGCTCCAGGTTCACATCTAAACCAGAATGAAAATCCCAGTACTTCAAAACAGAACCCTTCAAATCCTCT  602

Query  963  TCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACCA  1036
            |||||...|||||||||||.||||||||||..|.||||||||||||||||||||.|...||||||||||.||||
Sbjct  603  TCAGCACATAATTCCAGGCCCAAACTTGGATCGGGAACCCAGAATTCAAACAGACACGTTAAAGCAGGCCACCA  676

Query 1037  AGGACAGAGTCAGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAAAATGAATCCCCTGTTGATCCG  1110
            .||||||||.||.|||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct  677  GGGACAGAGCCAATGATTTCCACAAGTTGAAGCAAAGCCGGTTCTTTGATGAGAATGAATCCCCTGTTGATCCG  750

Query 1111  CAGCATGGCTCTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  751  CAGCATGGCTCTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGC  824

Query 1185  TGAGCTGGCTTACAATGAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGGT------GAGCGTGGGC  1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|      ||.||.|.||
Sbjct  825  TGAGCTGGCTTACAATGAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGATGATGAAGAACGAGAGC  898

Query 1253  -----CTGG--CCTCCATGCTATAACCATGAAACCCACCTCT------AAGTTTTTTGGT  1299
                 .|||  |||.||..||||..|    |||  ||.|.||      |.||..||    
Sbjct  899  TTCAGATGGATCCTGCAGACTATGGC----AAA--CAGCGCTTCAGTGATGTCCTT----  948