Nucleotide Global Alignment
Description
- Query:
- TRCN0000480993
- Subject:
- XR_002958675.1
- Aligned Length:
- 4302
- Identities:
- 505
- Gaps:
- 3733
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCATCCTATGAATTGGGTCATTCATGTCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCCCATGGGCTTTACATAGGGCAAGAGAACATTTCTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTCAAATTACAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTTTCTTTGCAAATGAAATATGAAATTTAGAGGCTCTTCTAAACACTTTAAATTTGATTTGACATTTTCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGATGTAAGTTTTAGAGAATGAGATTCTCCATAAAAATGACCCTTTCATGCTGTGGCCTCCATAGAAGATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTCCTCTATGCACACGCACCTCTGGGATCTCTCTGCCTCCAAATATCATCTTTTTTTTTTTTTTTTTTTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAGACAGAGTGTTGCTCCTCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGACTCACTGCAACCTCCGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCGAGTTTAAGCGATTCTTCTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAGTTTTAGTAGAGATGGGGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCAGCCTCTCCAAGTGCTGGGATTACAGGCATCAGCCACTATGCCCGGCTGGGATCATATGTTCCACACAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGTTGAATATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTCTCTGGTGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTTTGCAAATGCATCCCTTGTGTAATTTGTAGGTCACCGCGCCATGGGAACACGCTACCATGGGAAGGGAGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTGAGACGCGCAGGGAGGCTCCAGACAGGCTGGCCTGGGACACCAGCCGCTGCCCTTCCATAACATGGGGACAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGAGGGCAAAAGTTCAGCCCAACACGGAGGATCTTCGGGCAGGAGATGGGGAAGAAGGAGAAGCAGGAAGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAGCTCAGTGTGGGGGCGCGCATGGCATCCCGGTGGGACATCTGAGGCCCACACCCACCTGCTGTCCCTCCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCACGGTGGCCACCGAGGGTGAAGGCCTGGGGGGAGGCAGACGCCTGGCCCTTTACTCTCCCTCCCTGTCCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGCCGCTGGGTGGGGGCCGTCTCTGGGATGATCCCCGAGGGCAGGATCCGGGAGTCCCTGCAGAGGCATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGTCTGTCTTGATGGTGGAGTGGCGGCTCCAGCTGGGCGGGACCACCAGGGGAGGGGCTTGTGCTCTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCAGCCTGGTGTGGACCCACCTCCCGGGCGCTGGCTGCAATGACTTTCTCTTTCCCTTTGCAATTGCCTTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTGCCGCACAGAGCGGCCTGTCTTTATCAGAGGTCCCTCTGCCAGGGGGAGGGCCCCAGAGAAAACCAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGGTGAGAGACTGAGGAAGATAAAGCGTCCCAGGGCCTCCTACACCAGCGCCTGAGCAGGAAGGGGGAGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCATGACTACGAGGCCCTGGGAGGTCACTTTAGGGAGGGCTGTCCTGAAACCTGGAGCCTGGAGCAGAAAGTGA 2072
Query 1 -------------------------------------------------ATGAATCCACAGATCAGAAACCCGA 25
|||||.||.||..||||||||.|..
Sbjct 2073 AACCCTGGTGCTCCAGACAAAGATCTTAGTCGGGACTAGCCGGCCAAGGATGAAGCCTCACTTCAGAAACACAG 2146
Query 26 TGAAGGCAATGTATCCAGGCACATTCTACTTCCAA--TTTAAAA---ACCTA----------TGGGAA------ 78
||.||..||||||||.||.|||||||| |.|.||| ||||.|| |||.| |.||||
Sbjct 2147 TGGAGCGAATGTATCGAGACACATTCT-CCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGAATACCGT 2219
Query 79 ---GC----CAACGA------------------------------TCGGGACGAAA----CTT----GGC---- 103
|| |.|||| |..|||||.|| ||| |||
Sbjct 2220 CTGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCCAGG 2293
Query 104 ------------------------------TGTGCTTC----------ACCGTGG------------------- 118
|||||||| .|.||||
Sbjct 2294 TGTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTAC 2367
Query 119 AAG---------------------GTAT----------------------------AAAGC--GCC-------- 133
||| |||| .|||| |||
Sbjct 2368 AAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCT 2441
Query 134 -GCTCAG-------TTGT---------------------------------CTCCTGGAA-----------GAC 155
|||.|| .||| ||.||||.| ||.
Sbjct 2442 GGCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAA 2515
Query 156 GGGCG-TCTTCCG------------------------------------------------------------- 167
||||| |||.|.|
Sbjct 2516 GGGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGG 2589
Query 168 --AAAC-------------------------------------------------------------------- 171
||||
Sbjct 2590 GAAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCA 2663
Query 172 ---------------------CAGGTGGATTCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTT 224
|||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664 CCGCACGCTAAAGGAGATTCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTT 2737
Query 225 CTGCGACGACATACTGTCTCCTAACACAAAGTACCAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGACT 298
|||.||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||.|
Sbjct 2738 CTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGT 2811
Query 299 GTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTAC 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2812 GTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTAC 2885
Query 373 TACTTCCAGTATCCATGTTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGTCGCTGTGGAGATCATGGA 446
||||||..|.||.||..||||||||||||||||||||||||||||||||||||||.|.|.|||||||||||||.
Sbjct 2886 TACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGG 2959
Query 447 CTATGAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATAATGAGCCATTCAAGCCTTGGAAGGGAT 520
|||..|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||.
Sbjct 2960 CTACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGAC 3033
Query 521 TAAAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGAGTCTCCAG------------------------ 570
|||||..||||||||.|.|.|||.|.||.|.|||.|.|||||.||||.||
Sbjct 3034 TAAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAGTGAGGGGTCTCCCCGGGCCTCATG 3107
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3108 GTCTGTCTCCTCTAGCCTCCTGCTCATGTTGTGCAGGCCTCCCCTCCATCCTGGACCAGCTGTGCTTTTGCCTG 3181
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3182 GTCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCTCCCCTGCCTCACCACCTCCTCTCCGCTCTC 3255
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3256 CCAGGCTCTTCCTGCAGAGGCCTCTTTCTGCCTCCATGGCTATCCATCCACCCACCAAGACCCTGTTCCCTGAG 3329
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3330 CCTGCATGCCCCTAACCTGCCTTTTCCCATCTCCCCAGCATAACCTAATATTTTTTTTTTTTTTTTGAGACGGA 3403
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3404 ATTTCGCTCTGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAGGTTCA 3477
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3478 AGCGATTCTCCTGCCTCCGCCTCCCGAGTAGCTGGAATTACAGACGCCTGCCACCACGCACAGCTAACTTTTTT 3551
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3552 TTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTG 3625
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3626 ATCCGCCTATCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGCCCGGCGGCACAACCAAATCT 3699
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3700 TATTAAACTCACCCTAGGCTGGCCGCGGTGACTCATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAGGTGAG 3773
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3774 AGAATCGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGACAAAGCCCCATCTCTACAAAAAAATTAC 3847
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3848 AAAAAAAAAAAAAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCTACTTGGAAGGATGAAGTGGGAGGATTG 3921
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3922 CTTGAGCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCACGTCACTGAACTCCAGTCTGAGCAACAGATCGAG 3995
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3996 ACCCTGCCTGAAAATAAATCAATAAATAAACTCAACCGAAATGGGTATGAAAGTTGAAATGGGTATGTAAGTTG 4069
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4070 AAAACCAGAAGTTTTGAGAAACATCCTTTGTTAACTTTCATCCTACAAATTGGGTCATTCATGTCCTACGCAGC 4143
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4144 TAAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTG 4217
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4218 CAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGT 4291
Query 571 ---------- 570
Sbjct 4292 AAGTCTTGGA 4301
