Nucleotide Global Alignment

Description

Query:
TRCN0000480993
Subject:
XR_002958675.1
Aligned Length:
4302
Identities:
505
Gaps:
3733

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTCATCCTATGAATTGGGTCATTCATGTCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCCCATGGGCTTTACATAGGGCAAGAGAACATTTCTCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTCAAATTACAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCTTTCTTTGCAAATGAAATATGAAATTTAGAGGCTCTTCTAAACACTTTAAATTTGATTTGACATTTTCAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCAGATGTAAGTTTTAGAGAATGAGATTCTCCATAAAAATGACCCTTTCATGCTGTGGCCTCCATAGAAGATGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTTTCCTCTATGCACACGCACCTCTGGGATCTCTCTGCCTCCAAATATCATCTTTTTTTTTTTTTTTTTTTTTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTGAGACAGAGTGTTGCTCCTCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGACTCACTGCAACCTCCGCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCCGAGTTTAAGCGATTCTTCTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TAGTTTTAGTAGAGATGGGGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTCTCAGCCTCTCCAAGTGCTGGGATTACAGGCATCAGCCACTATGCCCGGCTGGGATCATATGTTCCACACAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGTTGAATATGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTCTCTGGTGTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCTTTGCAAATGCATCCCTTGTGTAATTTGTAGGTCACCGCGCCATGGGAACACGCTACCATGGGAAGGGAGCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTGAGACGCGCAGGGAGGCTCCAGACAGGCTGGCCTGGGACACCAGCCGCTGCCCTTCCATAACATGGGGACAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAGAGGGCAAAAGTTCAGCCCAACACGGAGGATCTTCGGGCAGGAGATGGGGAAGAAGGAGAAGCAGGAAGGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGAGCTCAGTGTGGGGGCGCGCATGGCATCCCGGTGGGACATCTGAGGCCCACACCCACCTGCTGTCCCTCCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCCACGGTGGCCACCGAGGGTGAAGGCCTGGGGGGAGGCAGACGCCTGGCCCTTTACTCTCCCTCCCTGTCCCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATGGCCGCTGGGTGGGGGCCGTCTCTGGGATGATCCCCGAGGGCAGGATCCGGGAGTCCCTGCAGAGGCATCAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCTGTCTGTCTTGATGGTGGAGTGGCGGCTCCAGCTGGGCGGGACCACCAGGGGAGGGGCTTGTGCTCTGCTGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTCAGCCTGGTGTGGACCCACCTCCCGGGCGCTGGCTGCAATGACTTTCTCTTTCCCTTTGCAATTGCCTTGGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TCCTGCCGCACAGAGCGGCCTGTCTTTATCAGAGGTCCCTCTGCCAGGGGGAGGGCCCCAGAGAAAACCAGAAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GAGGGTGAGAGACTGAGGAAGATAAAGCGTCCCAGGGCCTCCTACACCAGCGCCTGAGCAGGAAGGGGGAGGGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCATGACTACGAGGCCCTGGGAGGTCACTTTAGGGAGGGCTGTCCTGAAACCTGGAGCCTGGAGCAGAAAGTGA  2072

Query    1  -------------------------------------------------ATGAATCCACAGATCAGAAACCCGA  25
                                                             |||||.||.||..||||||||.|..
Sbjct 2073  AACCCTGGTGCTCCAGACAAAGATCTTAGTCGGGACTAGCCGGCCAAGGATGAAGCCTCACTTCAGAAACACAG  2146

Query   26  TGAAGGCAATGTATCCAGGCACATTCTACTTCCAA--TTTAAAA---ACCTA----------TGGGAA------  78
            ||.||..||||||||.||.|||||||| |.|.|||  ||||.||   |||.|          |.||||      
Sbjct 2147  TGGAGCGAATGTATCGAGACACATTCT-CCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGAATACCGT  2219

Query   79  ---GC----CAACGA------------------------------TCGGGACGAAA----CTT----GGC----  103
               ||    |.||||                              |..|||||.||    |||    |||    
Sbjct 2220  CTGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCCAGG  2293

Query  104  ------------------------------TGTGCTTC----------ACCGTGG-------------------  118
                                          ||||||||          .|.||||                   
Sbjct 2294  TGTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTAC  2367

Query  119  AAG---------------------GTAT----------------------------AAAGC--GCC--------  133
            |||                     ||||                            .||||  |||        
Sbjct 2368  AAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCT  2441

Query  134  -GCTCAG-------TTGT---------------------------------CTCCTGGAA-----------GAC  155
             |||.||       .|||                                 ||.||||.|           ||.
Sbjct 2442  GGCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAA  2515

Query  156  GGGCG-TCTTCCG-------------------------------------------------------------  167
            ||||| |||.|.|                                                             
Sbjct 2516  GGGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGG  2589

Query  168  --AAAC--------------------------------------------------------------------  171
              ||||                                                                    
Sbjct 2590  GAAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCA  2663

Query  172  ---------------------CAGGTGGATTCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTT  224
                                 |||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664  CCGCACGCTAAAGGAGATTCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTT  2737

Query  225  CTGCGACGACATACTGTCTCCTAACACAAAGTACCAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGACT  298
            |||.||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||.|
Sbjct 2738  CTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGT  2811

Query  299  GTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTAC  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2812  GTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTAC  2885

Query  373  TACTTCCAGTATCCATGTTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGTCGCTGTGGAGATCATGGA  446
            ||||||..|.||.||..||||||||||||||||||||||||||||||||||||||.|.|.|||||||||||||.
Sbjct 2886  TACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGG  2959

Query  447  CTATGAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATAATGAGCCATTCAAGCCTTGGAAGGGAT  520
            |||..|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||.
Sbjct 2960  CTACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGAC  3033

Query  521  TAAAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGAGTCTCCAG------------------------  570
            |||||..||||||||.|.|.|||.|.||.|.|||.|.|||||.||||.||                        
Sbjct 3034  TAAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAGTGAGGGGTCTCCCCGGGCCTCATG  3107

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3108  GTCTGTCTCCTCTAGCCTCCTGCTCATGTTGTGCAGGCCTCCCCTCCATCCTGGACCAGCTGTGCTTTTGCCTG  3181

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3182  GTCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCTCCCCTGCCTCACCACCTCCTCTCCGCTCTC  3255

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3256  CCAGGCTCTTCCTGCAGAGGCCTCTTTCTGCCTCCATGGCTATCCATCCACCCACCAAGACCCTGTTCCCTGAG  3329

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3330  CCTGCATGCCCCTAACCTGCCTTTTCCCATCTCCCCAGCATAACCTAATATTTTTTTTTTTTTTTTGAGACGGA  3403

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3404  ATTTCGCTCTGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAGGTTCA  3477

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3478  AGCGATTCTCCTGCCTCCGCCTCCCGAGTAGCTGGAATTACAGACGCCTGCCACCACGCACAGCTAACTTTTTT  3551

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3552  TTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTG  3625

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3626  ATCCGCCTATCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGCCCGGCGGCACAACCAAATCT  3699

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3700  TATTAAACTCACCCTAGGCTGGCCGCGGTGACTCATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAGGTGAG  3773

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3774  AGAATCGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGACAAAGCCCCATCTCTACAAAAAAATTAC  3847

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3848  AAAAAAAAAAAAAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCTACTTGGAAGGATGAAGTGGGAGGATTG  3921

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3922  CTTGAGCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCACGTCACTGAACTCCAGTCTGAGCAACAGATCGAG  3995

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3996  ACCCTGCCTGAAAATAAATCAATAAATAAACTCAACCGAAATGGGTATGAAAGTTGAAATGGGTATGTAAGTTG  4069

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4070  AAAACCAGAAGTTTTGAGAAACATCCTTTGTTAACTTTCATCCTACAAATTGGGTCATTCATGTCCTACGCAGC  4143

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4144  TAAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTG  4217

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4218  CAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGT  4291

Query  571  ----------  570
                      
Sbjct 4292  AAGTCTTGGA  4301

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