Nucleotide Global Alignment
Description
- Query:
- TRCN0000491644
- Subject:
- XM_006519631.3
- Aligned Length:
- 1890
- Identities:
- 818
- Gaps:
- 987
Alignment
Query 1 ATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGCGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTGTCGCTGCTCAAGCGCGTGAGCCAGACCCAGGCCCGCTTCCTCCAGCTCTGCCTGGAGCACTCGCTGGCCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTGCGCCGAGCTGCACGTCCTCGAACGCGAGGCCAACAGCCCCGGAATCATTAACCAATGGCAACAGGAATCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGGATAAAGTGATTTCCCTCCTGTTAACTCATCTGCCTTTGTTGAAGCCAGGAAACCTCGACGCGAAAGTAGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ATATATGAAACTGCTGCCCAAAATCCTGGCTCACTCTATTGAACACAACCAGCACATTGAGGAGAGCAGGCAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCTGTCCTATGCTTTGATACATCCAGCCACTTCGTTAGAAGACCGTAGTGCTTTAGCCATGTGGCTGAATCAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTGGAGGACCGCACGTCGACCAGCTTTGGTGGCCAGAACCGAGGCCGCTCAGACTCTGTGGATTATGGACAGAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACACTACTATCACCAAAGACAGAACTCTGATGACAAGCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGATTT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCATCAATGCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGAGAATGGCCATGTGCCCCTCTACTCCTCCTCA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TCTGTCCCCACCACAATCAATACGATTGGAACCAGCACAAGTACAAATGTTCCAGCCTGGCTGAAAAGCCTCCG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CCTGCACAAATATGCCGCGCTTTTCTCCCAGATGACCTATGAGGAGATGATGGCCCTCACCGAGTGCCAGCTGG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGGCGCAGAATGTTACCAAAGGTGCAAGACACAAAATTGTCATCAGTATTCAGAAGCTCAAAGAAAGACAAAAT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CTCCTGAAGTCTTTGGAAAGGGACATCATCGAGGGGGGCAGCCTGCGCATCCCGCTCCAGGAACTGCACCAGAT 962
||
Sbjct 1 ------------------------------------------------------------------------AT 2
Query 963 GATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGCCC 1036
|||||||||.||.|||||||||||||||||.||.||.||||||||.||||..|||.||||||
Sbjct 3 GATCCTGACACCCATCAAGGCCTACAGCTCTCCCAGTACCACCCCTGAGGTGCGCTGCCGGG------------ 64
Query 1037 CGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGC---CACTGGC 1107
|||||||||||||| |||||||..|||||.|||||||||||..|.||.||||| |||..||
Sbjct 65 ------AGCCCTCACTGATG------GAGAGCCCAAGCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACCAGC 126
Query 1108 GCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCT 1181
|||||.||||...||||.|||||.||||||||.||.||.||.||.|.||||||||||||||||||.||.|||||
Sbjct 127 GCCACAGCCAGTGCCTCAGCCGGTGCCAGCGGTGGACTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGAGCT 200
Query 1182 GGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGC 1255
|||.||||||||.|||||.||||||||||||||.|||||||||||.||.|||||||||||||||||||||||||
Sbjct 201 GGCTGTCGCCCCTCTGCCGGAGGGGGACCTCCCGGGGCAGTTCACCCGAGTCATGGGGAAAGTGTGCACACAGC 274
Query 1256 TCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAG 1329
||||||||||||||||.|||||.|||||||||||.||||||.||||||||.|||||||||||||..||||||||
Sbjct 275 TCTTGGTCTCCAGACCCGATGAAGAAAATATAAGCTCCTATCTACAGCTCTTAGACAAGTGTCTTGTTCATGAG 348
Query 1330 GCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCC 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 349 GCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCC 422
Query 1404 TCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCC 1477
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 423 TCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCCTCC 496
Query 1478 CGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTC 1551
|.||.||..|||||||||||.|.||||||||||||||||||||.||.||||||||||||.|.||||||||.|||
Sbjct 497 CAACAGCCAGCTCTGTGGGCAGCGGCATGGGCAGACGGAACCCACGACAGTACCAGATCGCATCTCGGAATGTC 570
Query 1552 CCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCC 1625
||||||||||||||.||.|||.||||||||||||||||.||||||||||||||||||.|||||.|.||.|.|||
Sbjct 571 CCTTCCGCCCGCCTTGGTCTCCTGGGCACCAGTGGATTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAACCC 644
Query 1626 CACCATCATGAAACAAGGAAGACAGAACCTGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCA 1699
||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||.|||||||
Sbjct 645 CACCATCATGAAACAAGGAAGACAGAACCTCTGGTTTGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCCGCA 718
Query 1700 CCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAG 1773
||||||||||.|||||||.|||||||||||||||||||||.|||||||||||.||||||||||||||||||||.
Sbjct 719 CCCACAGCTCCGTCCAGAAGACCCGCTCGCTGCCCGTGCATACTTCCCCACAAAACATGCTGATGTTCCAGCAA 792
Query 1774 CCAGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGA 1847
||||||||.||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.||
Sbjct 793 CCAGAATTTCAGCTTCCTGTGACTGAACCTGACATCAACAATAGGCTGGAGTCCTTGTGCCTCAGTATGACGGA 866
Query 1848 ACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC 1887
.||.||||||||||||||||||||||||||||||||.|||
Sbjct 867 GCATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAATC 906
