Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09983
- Subject:
- NM_001323309.2
- Aligned Length:
- 1638
- Identities:
- 399
- Gaps:
- 1203
Alignment
Query 1 ATGGCTGTCAGCCACCTGCCAACCATGGTCCAGGAATCGGTGACCTTCAAGGATGTGGCTATACTGTTCACCCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGTCAGCCACCTGCCAACCATGGTCCAGGAATCGGTGACCTTCAAGGATGTGGCTATACTGTTCACCCA 74
Query 75 GGAAGAGTGGGGGCAGCTGAGCCCCGCCCAGAGGGCCCTGTACAGGGACGTGATGCTGGAGAACTACAGCAACC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAAGAGTGGGGGCAGCTGAGCCCCGCCCAGAGGGCCCTGTACAGGGACGTGATGCTGGAGAACTACAGCAACC 148
Query 149 TGGTCTCACTGGGACTCTTAGGACCCAAACCAGATACGTTTTCCCAGCTAGAAAAAAGGGAAGTGTGGATGCCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGTCTCACTGGGACTCTTAGGACCCAAACCAGATACGTTTTCCCAGCTAGAAAAAAGGGAAGTGTGGATGCCA 222
Query 223 GAGGACACCCCTGGAGGCTTCTGTCTTGACTGGA---TGACTATGCCTGCCAGTAAGAAATCTACTGT---CAA 290
||||||||||||||||||||||||||||| |||| |.||| |||| |||
Sbjct 223 GAGGACACCCCTGGAGGCTTCTGTCTTGA-TGGAGTCTCACT----------------------CTGTTACCAA 273
Query 291 GGCAGAGATTCCTGAAGAAGAATTGGATCAATGG-ACAATAAAGGAAAGATTCAGTAGCAGTAGTCACTGGAAG 363
| |||.|| || ||.||| |||||...|| .||||||.||
Sbjct 274 G----------CTGGAG------TG---CAGTGGTACAATCTCGG------------------CTCACTGCAA- 309
Query 364 TGTGCT-AGCCTGCTGGAGTGGCAATGTGGAG--------GCCAGGAGATCAGTTTGCAGCGAG----TGGTAC 424
||| .|||| |..|||| .||| |.| ||| |||||.|.| |||| |||.||
Sbjct 310 ---GCTCCGCCT-CCCGAGT-TCAA----GCGATTCTCCTGCC------TCAGTCTCC--CGAGTAGCTGGGAC 366
Query 425 T-CACTCACC--CCAACAC-CCCATCACAGGA------ATGTGAT-------GAATCCGGG-AGCACTATG--- 477
| ||..|.|| |||.||| ||| ||| .||||.| ||..|.||| ..|||.|||
Sbjct 367 TACAGGCGCCTGCCACCACGCCC------GGATAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTG 434
Query 478 ---AG------CTC-ATCTCTTCAC--AGTG------------------CTCAAAGT-CAGGGATTTCAACCTA 520
|| ||| |||||||.|| .||| |.|||||| |.||||||.||..|.
Sbjct 435 GCCAGGGTGGTCTCGATCTCTTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCG- 507
Query 521 GCAAAAATGCCTTTGAGTGTAGTGAGTGTGGAAAAGTCTTCTCTAAGAGTTCAACTCTTAATAAACATCAGAAA 594
Sbjct 508 -------------------------------------------------------------------------- 507
Query 595 ATTCATAATGAAAAAAATGCAAATCAGAAAATTCATATTAAGGAGAAAAGATATGAATGTAGAGAATGTGGGAA 668
Sbjct 508 -------------------------------------------------------------------------- 507
Query 669 AGCCTTTCACCAGAGTACGCACCTTATCCATCACCAAAGAATTCACACTGGCGAGAAACCCTATGAATGTAAGG 742
Sbjct 508 -------------------------------------------------------------------------- 507
Query 743 AATGTGGCAAGGCCTTCTCAGTGAGCTCCTCACTTACGTACCATCAGAAAATTCATACTGGAGAGAAGCCTTTT 816
Sbjct 508 -------------------------------------------------------------------------- 507
Query 817 GAATGCAACTTATGTGGAAAAGCTTTTATCCGAAATATACACCTTGCCCATCATCATAGAATACATACTGGAGA 890
Sbjct 508 -------------------------------------------------------------------------- 507
Query 891 GAAACCTTTTAAATGTAACATTTGTGAAAAAGCCTTTGTGTGCAGGGCACACCTTACCAAACACCAGAATATCC 964
Sbjct 508 -------------------------------------------------------------------------- 507
Query 965 ACAGTGGAGAGAAACCCTATAAATGCAATGAATGTGGAAAAGCCTTTAATCAGAGTACAAGTTTCCTTCAGCAT 1038
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1039 CAGAGAATTCACACTGGAGAGAAACCCTTTGAATGTAATGAATGTGGGAAGGCCTTCAGGGTGAACTCTTCCCT 1112
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1113 TACTGAACATCAGAGAATTCATACTGGAGAGAAACCTTATAAATGTAATGAATGTGGGAAAGCTTTCAGGGATA 1186
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1187 ATTCATCCTTTGCACGACATCGGAAAATTCACACTGGAGAGAAACCTTACAGATGTGGCTTGTGTGAGAAAGCC 1260
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1261 TTTCGGGACCAATCAGCACTAGCCCAACATCAGAGAATTCATACTGGGGAAAAACCTTATACATGTAACATATG 1334
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1335 TGAAAAAGCCTTCAGTGACCATTCAGCCCTTACCCAACATAAGAGAATTCATACTAGGGAAAAACCTTACAAAT 1408
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1409 GTAAAATCTGTGAGAAAGCCTTTATCCGAAGCACTCACCTGACTCAACATCAGAGGATTCACACAGGAGAGAAA 1482
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1483 CCCTATAAATGTAATAAATGTGGGAAAGCTTTTAACCAGACTGCAAACCTCATTCAGCATCAGAGACATCATAT 1556
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1557 TGGAGAGAAG 1566
Sbjct 508 ---------- 507
