Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11816
- Subject:
- NM_133923.6
- Aligned Length:
- 2781
- Identities:
- 1113
- Gaps:
- 1479
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAGGGTGTCAGCTCGGCGCTTCTCCTGAGCGCGGGGCAGCTGGGGCCCGGGGCCGCCTGGTACCGCCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCAGCTCCGAGTGTAGCTGGCTCCGGAGGTCGCAGCCATCCGAGCTCCGCACCAATTTCTCGTCCCGCTGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGGCCGCGCAACTCCGAGTCCCGGCGGTCTGAGAGGCTACAATGGCCTGGTCCCGCCTCCGCCAAGCCGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGGCGAGCTGTGGCGACAGCCGTCGGGATTACAGCTCATTGCCTGCGCGCCACCTAAGCAGCGCTCGCGAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCCATGCCCGGTGCTCTGGGCACTGTGAACCCCCAACCCGTCCGCACCCTGGTCCCCCCGACCCTGGATGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTTCCTGATGCCCTACGGCCGCCTGATGATTCCCTACTCCTCTGGCGAGGACTCACCAAGGGACCTAACCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGGCCGACTCAGAAACGCCAAAATCCACGTAGAGAGAGCCGTCAAGCAGAAGAAGATCTTTATGATTCATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGATACCCAGTGATCCGGTGTCTCTTGCGTCAGAGGGGCTGGGTAGAGAAGAAGATGGTGCATCCCCCAGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGCCCTGCCAGCACCCCAGAAGGATCTCGATAGCTCCATGCTGGGTGATAGCGATGCCACGGAGGATGAGGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGAAGAGAACGAAATGTTTCGGGAGTCGCAGCTGTTGGACTTGGATGGTTTCCTGGAATTTGATGACCTAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGGATACATGCTTTGATGTCCCGCATGGTTCGAAATGAGACCCCCTACCTCATCTGGACCACTCGGCGGGATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGGATTGTCGCTTCCTTTCCAAGGATCAGATGATAAACCATTATGCCCGTGCAGGCTCCTTCACCACAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGGCCTTTGTCTCAACCTCCGGAATCTGCCGTGGTTTGATGAGGCCGATGCTGACTCTTTCTTCCCACGATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTACCGATTGGGGGCAGAGGATGACAAGAAAGCCTTCATAGAGGACTTCTGGCTGACAGCTGCCCGCAACGTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAAGCTGGTGGTGAAGTTGGAAGAGAAGTCACAGTCCATCTCCATCCAGGCAAGAGAGGAAGAGGCCCCAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATACACAGCCCAAGAAACAGGAAAAGAAGCTAGTGACCGTGTCCTCAGACTTTGTCGATGAGGCTCTGAGTGC 1184
Query 1 -------------------------------ATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCC 43
|..|||||.||||||||||...|..|||||||.|||||||.||
Sbjct 1185 ATGCCAGGAGCACCTTAGCAGCATAGCCCACAAAGACATTGACAAGGACCCCAACTCCCCGCTCTACCTCAGCC 1258
Query 44 CCGAGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGAC 117
||||.|..|||||||..|||||.|||||||||||||||.|.||.||.|||||||||||.|||||..||||.||.
Sbjct 1259 CCGATGATTGGTCCCAGTTCCTTCAGCGCTACTACCAAATAGTTCATGAAGGGGCAGAGCTCAGATACCTGGAG 1332
Query 118 ACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGA 191
...||.||||||||||||||.||||||||.||||||||.|||..|||||||||||||.||||||||||.|||||
Sbjct 1333 GTCCAAGTCCAGCGCTGTGAAGACATCCTACAGCAGCTTCAGAACGTGGTACCCCAGTTAGACATGGAGGGGGA 1406
Query 192 TCGCAACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGTGGACGAGGCATCATGTGCATGGACCACCTGGAGG 265
|||.||||||||||||||||||||.||||||||||||||.||.|||||.||.|||||||||.|||.||||||.|
Sbjct 1407 TCGGAACATCTGGATCGTGAAGCCCGGAGCCAAGTCCCGAGGCCGAGGGATTATGTGCATGAACCGCCTGGATG 1480
Query 266 AGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAG 339
|||||||||||||||||.||.||||||||.||.|.||||||||.|||||||||.|.|||||||||||.||||||
Sbjct 1481 AGATGCTGAAGCTGGTGGACTGCAACCCCATGCTCATGAAGGATGGCAAGTGGATCGTGCAGAAGTACATTGAG 1554
Query 340 CGGCCCCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACAGTGGTTCCTGGTAACTGACTGGAACCCACTTAC 413
||||||||.||.|||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 1555 CGGCCCCTGCTTATCTTCGGCACCAAGTTTGACCTGAGACAGTGGTTCCTGGTGACTGACTGGAACCCACTCAC 1628
Query 414 CGTGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAG 487
|||||||||||||||.||||||||.||.|||||.|||||.||||||||||||||||||||||||||||||||.|
Sbjct 1629 CGTGTGGTTCTACCGAGACAGCTACATTCGCTTCTCCACACAGCCCTTCTCCCTGAAGAACCTGGACAACTCTG 1702
Query 488 TGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGAC 561
||||||||||.||||||||||||||||..|||.|||||...||.||.||.|||||.||..||||.||.|||||.
Sbjct 1703 TGCACCTGTGTAACAACTCCATCCAGAGACACTTGGAGGCTTCCTGTCACCGGCACCCGATGCTGCCCCCAGAT 1776
Query 562 AACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCAT 635
|||||||||||.|||||||||||.|||||||||.||||||||.|.|.|||||||||.||.|||||||.|.||||
Sbjct 1777 AACATGTGGTCCAGCCAGAGGTTTCAGGCCCACTTGCAGGAGGTAGATGCCCCAAAGGCCTGGTCCAGCGTCAT 1850
Query 636 CGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAATGTCGGAAGGCCA 709
||||||.||||||||||.||||||||||||.||.||.|||||||||||.||.|.||||||.||.||||||||||
Sbjct 1851 CGTGCCAGGCATGAAGGCTGCTGTGATCCATGCCCTGCAGACCTCCCAAGATAACGTGCAGTGCCGGAAGGCCA 1924
Query 710 GCTTTGAGCTCTATGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGAGATCAACGCCAGC 783
||||||||||||||||.||.|||||.|||||.|||||.|||||||||||||||.|||||||.|||||.||||||
Sbjct 1925 GCTTTGAGCTCTATGGGGCAGACTTTGTGTTTGGGGAAGACTTCCAGCCCTGGTTGATTGAAATCAATGCCAGC 1998
Query 784 CCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGT 857
|||||.||||||||.|||||.||.|||||||||||.||||||||.||.|||||.||.||.||||||||.|||||
Sbjct 1999 CCCACCATGGCACCTTCCACGGCTGTCACTGCCCGCCTCTGTGCCGGTGTGCAGGCAGATACCCTGCGTGTGGT 2072
Query 858 CATTGACCGGAGGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTGCTGTGGAGG 931
|||.||||||.|.||||||||||.||||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CATCGACCGGCGCCTGGACCGCAGCTGTGATACGGGAGCCTTTGAGCTCATCTATAAGCAGCCTGCTGTGGAGG 2146
Query 932 TGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGATGTGTCATCGG 1005
|||||||.||.|||||.|||||||||||.||.|||||||..|||||||||||||||.||.|..||.||||||||
Sbjct 2147 TGCCTCAGTACGTGGGTATCCGGCTCCTAGTGGAGGGCTCTACCATCAAGAAGCCCGTGCCCGTGGGTCATCGG 2220
Query 1006 CGGATGGGGGTCCGCCCAGCAGTCCC---TCTGCTGACCCAGCGAGGCTCTGGGG------------------- 1057
||||..|||||||||.||.||.|||| ||||||||||||||.|||||||||||
Sbjct 2221 CGGACAGGGGTCCGCTCATCACTCCCTCATCTGCTGACCCAGCAAGGCTCTGGGGAAAGCAAGGACTCAGGCTC 2294
Query 1058 -------------------------------------------------------------------------- 1057
Sbjct 2295 CCCTACCCACAGGTCAGCTTCTAGGAAAAATGCTAGGGCCGAGAGCCTGGAGCACACCGAGAAGCCGGAACCTG 2368
Query 1058 ---------------------------------AAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGGCCCAG 1098
||||||.|..|||||||||.||||||||..||||||||..|
Sbjct 2369 CGGCCGTCGCCTCTGTCTCCGGAAAGGGGAAGAAAGCCCCTTTCCACTTCCCTAGCCTCCATTCCAAGGCCTGG 2442
Query 1099 CTGCCTTCTCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA 1172
|||||||||||||.|||.|.|||||.||||||||.|||||||||||..||.||...|.|||||||||||.||||
Sbjct 2443 CTGCCTTCTCCCCGTGTGCACCGACCCCAGGGCCGGGTCCTCAGACTCCAACATGACCAGCTGGTGGGCTCTAA 2516
Query 1173 GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACC 1246
|||.|||||.|||||||||||||||||||.||||||.||.||.||.|||||..|.||.|||.|||||||..|||
Sbjct 2517 GGCTCTGTCAACCACAGGCAAGGCCTTGATGACTCTTCCTACTGCCAAGGTTCTGATGTCCTTCCCACCTCACC 2590
Query 1247 TTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG------------------ 1302
.||||.|||||.|||||||.|||||.|||||.|||.|||||||||||.||||.|||
Sbjct 2591 CTGATCTCAAGCTGGCACCTAGCATGCTGAAACCAGGAAAGGTGGGCTTCGAGCTGTGCTGCACAACCTGGCGG 2664
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2665 GTAGTGCTGAGTGGTGGGATCGGGGAAGAAGGGCACAGACAGAGGGCAGCACCCAGACCAAGCAGCGCACCAGG 2738
Query 1303 ------------------------------------------- 1302
Sbjct 2739 GAAGGGCTTATCTTCCACAGAACCCTGTTCCAAGACAGAGACC 2781
