Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_138026.2
- Aligned Length:
- 6161
- Identities:
- 162
- Gaps:
- 5975
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGTTAGAGCCTCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAGTTGGCACTACCCGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGAGGAATGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGATTGGGAAGATGGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAATCCTTGGCACAATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTGAAGGTGTTTAATGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAGGAAGTGAAGACACGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCCTGTCGAGGCTGTATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCATAAAATGTTTAAAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTGGCTTATCTATGCTTAAAGATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGATGAGAAATGGTTTTCAGAGTAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAGAGTTCACTGCCTAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAACTTAAAGTGATAACA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCCCAACTCTGTTTGCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGTGTGGGAGGAATACACAACCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACGGGTTTGCATAAGAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCTTCCAGAAAAGCAGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCACTCCACACAACTGTGGAGAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCCCATAACAGGGGTACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAGAGGATAAAAACTTCCCTCCAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAGATCTATGAATTTCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTGCCTTCTCTCTAACTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGAATGGGGCGGGAGGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTTTCCTCAGCGCTTTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGACCACAACAGGGAGGCCTAATAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCTTCCACAGTCCCTGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGTGACTTCCAGCCACCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTGAGTTGGGTAGAGGCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCAGGAGAACCAAGAGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAGCCCCAGCTGGAGTGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCCCTTCATGCATCTGAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTGTCTGTTTTGTAGACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCTAGTCTGAGGGGCTTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATGCACTTGTGTGGAACA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAACGGTAAAGAGACAAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTTGAACCCACGTCTGCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCATTTTTAGTGTGTTTTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAACGTTTAGTGTCTCTTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGCATGTATGGAGATGTCAGATGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACAGATAACTAGAACTCAGGGCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCGTGGCAGAACTCCACG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCCCTGTCGGTGCCACGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCAGGGATTCTCTTATAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTTGGATATGAGTCTCAGGGAGGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCAGCTAGAATAACAAGGTCGGAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTTTCCTCCTTAGCAGATCATACC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGGTAAGCACATGCAGGG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAGAGATCCTAGTAAAGC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGTGGGCTGGAAAATGTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCTGTGGATCACACCTGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGCATGGTAGATGAGGCTGGAGAC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCATCGCATGATTTTAAC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGCCAAATTGGCCACATGATTTAT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTGATCTGTGTCCAAATAACTCTT 3996
Query 1 ---------------------------------------------------ATGCAGTGGCGCCATCTCAGCTC 23
.||||||||.||.|||||.||||
Sbjct 3997 TTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCTTGAGCTGGAGTGCAGTGGTGCTATCTCGGCTC 4070
Query 24 ACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTG 97
||||.|||||||..||||..||||||||||||||||.||||||..||||||||||||||||||||||||||...
Sbjct 4071 ACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGATTACAGGCACC 4144
Query 98 TGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCG 170
.|||||.||.|.||.|||| |||||||||||||||.|||||||||||||||||.|||||||||.||||||||||
Sbjct 4145 CGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAGCTGGTCTCG 4218
Query 171 AACTCCTGACCTCAAG---------------------------------------------------------- 186
||||||||||||||.|
Sbjct 4219 AACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCA 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 GCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAGAATATTTGAACAACTCTAGCA 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 AGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTTTGCAGGAAGTCCTTTCTGA 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 TACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATATAAAAGTTGTGTACCACGATA 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 AAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATCCTGGGGTGACTCCAA 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 TACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCCTCGGTATGCACACTC 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 GAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAATGTGACCTTAGTGTTGTAG 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 ATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTGAACTGTGATAAGCAA 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 TGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGATGGAGGAGCACCCAGGGTGC 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 TCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGGAGATTCCCCGTTTTG 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 TGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCTGGCTGACCACTGCCA 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 GGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTCACAGCTCCAGGCCTG 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 CCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAGCCAAGTTTAATTTGG 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 CCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTGCATTTAAATTAAATAAAGT 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 TTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGTACACTTGCTTTTATT 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 AATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTACTTTCCAAGGGGCAAGAGATT 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 CTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAAGAAATTTGTGTGACT 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 GTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGGCCAGTGATACTCTAT 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 GGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGATGGGAAAAGTTGTCTC 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 AGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAGAAGCTTCAGTATAACTCAAAA 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 CACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGCGATGTTGTGTGCACAGTAA 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 GGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGGCCCACCAATCGCCTG 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 GACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCAC 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 ATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCTTGTTGTGAA 5994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5995 GCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGTTTTCTTGACACTTAGATTTAA 6068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6069 CCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGTAACAGTAATGTA 6142
Query 187 ------------------- 186
Sbjct 6143 TAAAGTGCCGATGATGTAA 6161
