Construct: sgRNA BRDN0001147664

Construct Description:

Construct Type:
sgRNA
Other Identifiers:
n/a
DNA Barcode:
GGGTCCAGGAAAAGTGTTTG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PRKG1 (5592)
Gene Description:
n/a
CRISPR Mechanism
CRISPRko

Vector Information:

Vector Backbone:
pXPR_003
Pol II Cassette 1:
EF1A-PuroR
Pol II Cassette 2:
n/a
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Additional Information:

Addgene ID:
77005

Gene matches for this target sequence (CRISPRko, PAM=NGG, human):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000010.11 10 51467786 + PRKG1 NNNTCCAGGAAAAGTGTTTG NGG 0 1.0 Tier I
2 NC_000005.10 5 150375730 + TCOF1 NNNTCCAGGAAAAGTCCTTG NGG 2 0.0 Tier I
3 NC_000010.11 10 95377092 + SORBS1 NNNTCAGGGAAAAGTGTTTG NGG 2 0.6555 Tier II
4 NC_000001.11 1 224556476 - CNIH3 NNNTCCAGCAAAAGTGTTTG NGG 1 0.5385 Tier II
5 NC_000002.12 2 219479475 - SPEG NNNTCCAGGAGAAATGTTTG NGG 2 0.4875 Tier II
6 NC_000007.14 7 55433687 + LANCL2 NNNTCCACAAAAAGTGTTTG NGG 2 0.3956 Tier II
7 NC_000003.12 3 186231193 + DGKG NNNTCCAGGAAAAGTGATTT NGG 2 0.3733 Tier II
8 NC_000022.11 22 25641713 + GRK3 NNNTCCAGGAAAAGTGTGTG NGG 1 0.3333 Tier II
9 NC_000019.10 19 35102910 - LOC124904701 NNNTCCAGGAAGAGTGTTTC NGG 2 0.3095 Tier II
10 NC_000014.9 14 78561674 - NRXN3 NNNTCCAGGAAGAGTGTTCG NGG 2 0.1992 Tier II
11 NC_000021.9 21 17585989 - CXADR NNNTACAGGAAAAGTGTTAG NGG 2 0.1633 Tier II
12 NC_000006.12 6 44298059 + POLR1C NNNTCCAGGAAAAGCGTCTG NGG 2 0.1169 Tier II
13 NC_000015.10 15 60620667 + RORA NNNTCCAGGAGAAGTGTTTG NGA 2 0.0451 Tier II
14 NC_000009.12 9 132793411 - AK8 NNNTCCAGGAAAAGTGTTTG NTG 1 0.039 Tier II
15 NC_000007.14 7 137636299 + DGKI NNNTCCAGGATAAGTGGTTG NGG 2 0.0362 Tier II
16 NC_000020.11 20 59002749 - CTSZ NNNTCCAGGAAGAGGGTTTG NGG 2 0.0361 Tier II
17 NC_000012.12 12 89491856 - POC1B NNNTCCAGAAAAAGGGTTTG NGG 2 0.0321 Tier II
18 NC_000006.12 6 168568392 - SMOC2 NNNTCCAGGAAAAGTGGTGG NGG 2 0.0294 Tier II
19 NC_000008.11 8 80647865 + ZNF704 NNNTCCAGGAACAGGGTTTG NGG 2 0.0132 Tier II
20 NC_000010.11 10 50471528 - SGMS1 NNNACCAGGAAAAGTGTTTG NGT 2 0.0077 Tier II
21 NC_000009.12 9 14205953 - NFIB NNNTCCAGGAAAAGTGTGTG NGT 2 0.0054 Tier II
22 NC_000001.11 1 216643672 - ESRRG NNNTCCAGGAAAAGTCTTTA NGG 2 0.0 Tier II
23 NC_000012.12 12 94640135 + TMCC3 NNNTCCAGGAAAAGTCTTTG NTG 2 0.0 Tier II
24 NC_000015.10 15 76701164 - SCAPER NNNTCCAGGAAAAGTTATTG NGG 2 0.0 Tier II
25 NC_000020.11 20 45707709 + WFDC13 NNNTCCAGGAAAAGTTTTTG NGG 1 0.0 Tier II
26 NC_000003.12 3 136471358 + STAG1 NNNTCCAGGCAAAGTTTTTG NGG 2 0.0 Tier II
27 NC_000006.12 6 166859616 - RPS6KA2 NNNTCCAGGGAAAGTCTTTG NGG 2 0.0 Tier II
28 NC_000001.11 1 105487495 + LOC105378881 NNNTCCAGGAAAAGTATTTT NGG 2 0.7 Tier III
29 NC_000008.11 8 117286742 - LOC105375716 NNNTCCAGGAAAAGTGATTG NGG 1 0.5333 Tier III
30 NC_000008.11 8 117286742 - LOC105375717 NNNTCCAGGAAAAGTGATTG NGG 1 0.5333 Tier III
31 NC_000009.12 9 1357329 - LOC102723803 NNNTCCAGGAAAGGTGCTTG NGG 2 0.4604 Tier III
32 NC_000020.11 20 22413310 + LOC284788 NNNTCCAGGAAAAATGTCTG NGG 2 0.3214 Tier III
33 NC_000019.10 19 35102910 - HPN-AS1 NNNTCCAGGAAGAGTGTTTC NGG 2 0.3095 Tier III
34 NC_000018.10 18 14556566 - LOC105372004 NNNTCCAGGAAATGTATTTG NGG 2 0.3 Tier III
35 NC_000009.12 9 97791191 + PTCSC2 NNNTGGAGGAAAAGTGTTTG NGG 2 0.3 Tier III
36 NC_000020.11 20 5473253 + LOC643406 NNNTCCAGGAGAAGTGTCTG NGG 2 0.2786 Tier III
37 NC_000020.11 20 5473253 + LOC107985411 NNNTCCAGGAGAAGTGTCTG NGG 2 0.2786 Tier III
38 NC_000013.11 13 106624233 + ARGLU1-DT NNNTCCAGGAAATGTGTATG NGG 2 0.2 Tier III
39 NC_000002.12 2 51872085 + NRXN1-DT NNNTCCAGGATAATTGTTTG NGG 2 0.0821 Tier III
40 NC_000015.10 15 60620667 + RORA-AS1 NNNTCCAGGAGAAGTGTTTG NGA 2 0.0451 Tier III
41 NC_000014.9 14 106086821 + IGH NNNTCCAGGAAAAGGGCTTG NGG 2 0.0353 Tier III
42 NC_000002.12 2 87326758 - LOC105374848 NNNCCCAGGAAAAGTGTTTG NTG 2 0.0252 Tier III
43 NC_000008.11 8 56498318 - LOC101929398 NNNTCCAGAAAAAGTGTTTG NGT 2 0.0104 Tier III
44 NC_000008.11 8 56498318 - PENK-AS1 NNNTCCAGAAAAAGTGTTTG NGT 2 0.0104 Tier III
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Gene matches for this target sequence (CRISPRko, PAM=NGG, mouse):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000085.6 19 31302337 - Prkg1 NNNTCCTGGAAAAGTGTTCG NGG 2 0.1207 Tier I
2 NC_000076.6 10 123337167 - Tafa2 NNNTTCAAGAAAAGTGTTTG NGG 2 0.6364 Tier II
3 NC_000073.6 7 84028723 + Cemip NNNTCCAGGAAAAATGTTTT NGG 2 0.525 Tier II
4 NC_000072.6 6 87709745 - 1810020O05Rik NNNTGCAGGAAAAGTGCTTG NGG 2 0.4235 Tier II
5 NC_000086.7 X 98298235 - Ar NNNTTCAGAAAAAGTGTTTG NGG 2 0.4091 Tier II
6 NC_000068.7 2 140677258 + Macrod2 NNNTCTAGGAAAAGTGTGTG NGG 2 0.3095 Tier II
7 NC_000077.6 11 107266421 - Pitpnc1 NNNTTCAGGAAAAGTGTCTG NGG 2 0.2727 Tier II
8 NC_000077.6 11 30823891 + Psme4 NNNTACTGGAAAAGTGTTTG NGG 2 0.25 Tier II
9 NC_000067.6 1 72490776 + Marchf4 NNNTCTAGGAACAGTGTTTG NGG 2 0.2444 Tier II
10 NC_000073.6 7 138373059 - Tcerg1l NNNTCCTGTAAAAGTGTTTG NGG 2 0.2333 Tier II
11 NC_000079.6 13 21528659 - Zkscan8 NNNTCCAGAAATAGTGTTTG NGG 2 0.2143 Tier II
12 NC_000074.6 8 70155512 + Mef2b NNNTCCAGGAGCAGTGTTTG NGG 2 0.1711 Tier II
13 NC_000074.6 8 70155512 + Gm45929 NNNTCCAGGAGCAGTGTTTG NGG 2 0.1711 Tier II
14 NC_000073.6 7 96209430 + Tenm4 NNNCCCAGGAAAAGTGTTGG NGG 2 0.1618 Tier II
15 NC_000076.6 10 83323853 - Slc41a2 NNNTGCAGGAAACGTGTTTG NGG 2 0.1263 Tier II
16 NC_000077.6 11 85785263 + Bcas3 NNNTCCAGGAAAAGTGTCAG NGG 2 0.1224 Tier II
17 NC_000067.6 1 8649166 - Sntg1 NNNTCCAGGAAATGTGTGTG NGG 2 0.1 Tier II
18 NC_000072.6 6 134755330 - Dusp16 NNNTCCAGGAAAAGTGTGTG NAG 2 0.0864 Tier II
19 NC_000077.6 11 4199244 + Tbc1d10a NNNTCCAGGAACTGTGTTTG NGG 2 0.0789 Tier II
20 NC_000067.6 1 84895178 + Fbxo36 NNNTCCAGGAAGAGGGTTTG NGG 2 0.0361 Tier II
21 NC_000073.6 7 40990825 - 4930433I11Rik NNNTCCAGGACAAGTGTTTG NGA 2 0.0278 Tier II
22 NC_000076.6 10 121563410 - Tbk1 NNNTCCAGGGAAAGGGTTTG NGG 2 0.0278 Tier II
23 NC_000075.6 9 9899372 - Cntn5 NNNTCCAGGAGAAGTGTTTG NGC 2 0.0144 Tier II
24 NC_000079.6 13 59506759 - Agtpbp1 NNNTGCAGGAAAAGTGTTTG NGC 2 0.0133 Tier II
25 NC_000073.6 7 112249434 - Mical2 NNNTTCAGGAAAAGTGTTTG NGT 2 0.0103 Tier II
26 NC_000068.7 2 54717503 + Galnt13 NNNTCCTGGAAAAGTGTTTG NGC 2 0.0097 Tier II
27 NC_000068.7 2 55026220 + Galnt13 NNNTCCTGGAAAAGTGTTTG NGC 2 0.0097 Tier II
28 NC_000071.6 5 112247625 - Cryba4 NNNTCCAGGAAAAGAGTTTG NGT 2 0.0093 Tier II
29 NC_000083.6 17 40567052 - Gm44501 NNNTCCAGGAAAAGTGGTTG NTG 2 0.0046 Tier II
30 NC_000081.6 15 58346649 + Anxa13 NNNTCCAGGAAAAGCTTTTG NGG 2 0.0 Tier II
31 NC_000077.6 11 72154430 + 4933427D14Rik NNNTCCAGGAAAAGTCTTTT NGG 2 0.0 Tier II
32 NC_000079.6 13 103193571 - Mast4 NNNTCCAGGAAAAGTTTTTG NCG 2 0.0 Tier II
33 NC_000076.6 10 125770610 - Gm29862 NNNTCCAGGTAAAGTGTTTA NGG 2 0.8272 Tier III
34 NC_000072.6 6 70116786 + Igk NNNTCAAGGAAAAGAGTTTG NGG 2 0.5376 Tier III
35 NC_000076.6 10 117230295 - Gm31963 NNNTCCAGGAAAAGTGATTA NGG 2 0.5 Tier III
36 NC_000073.6 7 129791866 + Gm33323 NNNTCCATGAATAGTGTTTG NGG 2 0.2083 Tier III
37 NC_000080.6 14 13213022 + Gm5087 NNNTGCAGGCAAAGTGTTTG NGG 2 0.2 Tier III
38 NC_000077.6 11 55947283 - LOC105244170 NNNTCCAGGAAAGGTGTTGG NGG 2 0.163 Tier III
39 NC_000073.6 7 7095327 - Gm6828 NNNTGCAGGAAAAGTGTTTG NAG 2 0.1556 Tier III
40 NC_000075.6 9 23035446 - Gm36743 NNNTCCAGGGACAGTGTTTG NGG 2 0.1462 Tier III
41 NC_000083.6 17 84938988 - 1110020A21Rik NNNTCCAGGAGAAGGGTTTG NGG 2 0.0325 Tier III
42 NC_000073.6 7 38766995 + Gm21276 NNNTCCAGGACAAGTGTTTG NGA 2 0.0278 Tier III
43 NC_000073.6 7 38905995 + Gm21142 NNNTCCAGGACAAGTGTTTG NGA 2 0.0278 Tier III
44 NC_000073.6 7 39261159 + Gm16387 NNNTCCAGGACAAGTGTTTG NGA 2 0.0278 Tier III
45 NC_000069.6 3 106284016 + Gm6522 NNNTCCAGGGAAAGGGTTTG NGG 2 0.0278 Tier III
46 NC_000075.6 9 69828110 + B230323A14Rik NNNTCCAGGAAAAGTGTTTT NGT 2 0.0113 Tier III
47 NC_000080.6 14 48855603 + Gm41149 NNNTACAGGAAAAGTTTTTG NGG 2 0.0 Tier III
48 NC_000074.6 8 128258899 - A930035F09Rik NNNTCCATGAAAAGTCTTTG NGG 2 0.0 Tier III
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Other clones with same target sequence:

(none)