Construct: shRNA TRCN0000056522

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_018922.2-1046s1c1
DNA Barcode:
CTAACCAGATTCCAGAGGATT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PCDHGB1 (56104)
Gene Description:
protocadherin gamma subfamily B, 1
Transcript:
RefSeq NM_018922.2 (CURRENT)
Match location:
Position 1046 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000056522)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTAACCAGATTCCAGAGGATT
Hairpin Sequence:
5'-CCGG-CTAACCAGATTCCAGAGGATT-CTCGAG-AATCCTCTGGAATCTGGTTAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTAACCAGATTCCAGAGGATTCTCGAGAATCCTCTGGAATCTGGTTAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTAACCAGATTCCAGAGGATTCTCGAGAATCCTCTGGAATCTGGTTAG-3'

Other clones with same target sequence:

(none)