Construct: ORF TRCN0000465704

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004985.1_s317c1
Derived from:
ccsbBroadEn_13164
DNA Barcode:
AGTTGCTCGGTCCCTCTCATGAGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ERICH6 (131831)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000465704
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 131831 ERICH6 glutamate rich 6 NM_001308234.2 100% 100%
2 human 131831 ERICH6 glutamate rich 6 NM_152394.5 77.9% 77.9% 1_438del
3 human 131831 ERICH6 glutamate rich 6 XM_005247120.3 55.2% 53.8% 1_438del;1498_1499ins229;1536_1537ins224
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1617
ORF length:
1551
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc tgaaatgagt atagatagaa atattcatcg caatttgtct ccaggaattc
121cagtatcagt acaaacagaa gaaagttggc tccaagattt gtctgataaa gtgcaatcga
181ggaagaaagc ctctaaagag aaagctgaac ctgaatgtct ggcatctaag ttaagagaaa
241aatgggtaat taatccagaa gagtcgaaac taaatatttt atatgagctg gagtttaagg
301aagacttcat aacactgttc gagccttctc taagaacgtt acccagcatc ggaccaccat
361ccattctggc atacaaagaa gagagctcca atttaggcat taacttcaag gatgaagagg
421aggagacatc acccaaatgt gaattttgtg gcagcgatct aagagcattt ttttctaatg
481tggatgtttc ctctgaacca aaagggcatg cctcctgttg tattgctttc caaaatctga
541ttgactatat ctatgaggag caaataaaaa ccaaaccccc taaagctgaa ttaattgcta
601ttgaccctca tgcagcccat ggtagtgagg tcgacagact caaggcaaaa gaaaaagccc
661tgcaaaggaa acaggagcaa cgaatggcca gacattttgc aataatatca agggaacaga
721ctcatttctc tgaagatgat tcaaagcgct taaaaacaat ttcttatcaa ctttctgtgg
781atattccaga aaaacagata attgatgaca ttgtatttga ttttcaacta agaaacagta
841acatgtctat catttgttgt gattctcgga tagcatgtgg aaaggttgtc aggaatgagc
901tcttagagaa gcactacaaa catgggagca agtttctgac ttcatttcca gatgggacaa
961cacaaatatt ctatccatct ggaaacctag ccatcattcg agtgcccaac aaggtaaatg
1021gttttacttg tatagtccaa gaagatatgc ccactaaccc tgctatccta gcagtgctgg
1081attcctctgg cagaagttcc tgctatcatc ccaatggaaa tgtctgggta tacatcaata
1141tcttgggagg tcaatattca gatcaagccg gcaacagaat aagggcttgg aattggtcaa
1201attccatcac ttcctcaccc tttgtttcat ttaaacctgt ctttctggct ttgaaccgtt
1261atattggagt ccgcatctta gaacaagaca agatttctat aacttttcta gcaatgggcc
1321aacaggcaag aatcagtgtt GGAACCAAAG TGAAGCTACC AAACCCTGAG GAGATTCCAA
1381TCCTCCGATA CGTAAGTGGA GATGACCTTC TTCTGCTGGC CAGTTTAATA AAGATCCGTC
1441GCCTGTTTCA TAAACTTGAA GGATGTGTGA ATTTTCCCTC AAGCCAGGTT TGGGAAAAAT
1501TAAAGCAACC TTCCTACCTT TCTTCACTTT CTCTAAAACT AATTGCCCTT TGTCACAGTT
1561CTGGTATAAA GCAAGATATA ATGAAGACAA TAAGAAATAT AATAAATGAA GAAATTTACC
1621CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1681TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1741ATATATCTTG TGGAAAGGAC GAAGTTGCTC GGTCCCTCTC ATGAGTACGC GTTAAGTCga
1801caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)