Construct: ORF TRCN0000465881

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004773.1_s317c1
Derived from:
ccsbBroadEn_05599
DNA Barcode:
TGAGTTATTATACCGCAGATCAAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MUSTN1 (389125)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000465881
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 389125 MUSTN1 musculoskeletal, embryonic ... NM_205853.4 99.5% 98.7% 60C>G
2 human 100526772 STIMATE-MUSTN1 STIMATE-MUSTN1 readthrough NM_001198974.3 21.4% 20.9% (many diffs)
3 mouse 66175 Mustn1 musculoskeletal, embryonic ... NM_181390.3 85.3% 85.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
93
ORF end:
339
ORF length:
246
Sequence:
1TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT
61GATCAACAAG TTTGTACAAA AAAGTTGGCA CCATGTCCCA GGCTGGTGCT CAGGAAGCCC
121CTATCAAGAA GAAGCGCCCC CCTGTGAAGG AGGAGGACCT GAAGGGGGCC CGAGGAAACC
181TGACCAAGAA CCAGGAAATC AAGTCCAAGA CCTACCAGGT CATGCGAGAG TGTGAGCAAG
241CTGGCTCGGC CGCCCCGTCG GTGTTCAGCC GCACCCGCAC AGGTACCGAG ACTGTCTTTG
301AGAAGCCCAA AGCCGGACCC ACCAAGAGTG TCTTCGGCTT GCCAACTTTC TTGTACAAAG
361TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
421GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
481ACGATGAGTT ATTATACCGC AGATCAAGAC GCGTTAAGTC gacaatcaac ctctggatta
541caaaatttgt gaaagatt

Download FASTA (ORF) (Full)