Construct: ORF TRCN0000466048

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012741.1_s317c1
Derived from:
ccsbBroadEn_06570
DNA Barcode:
TTTTAAGACAAAATGCATTTTCAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MCM5 (4174)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466048
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4174 MCM5 minichromosome maintenance ... NM_006739.4 99.9% 100% 831T>C;1707G>A
2 human 4174 MCM5 minichromosome maintenance ... XM_006724242.4 96.8% 94% (many diffs)
3 mouse 17218 Mcm5 minichromosome maintenance ... NM_001302540.1 88.2% 95.6% (many diffs)
4 mouse 17218 Mcm5 minichromosome maintenance ... NM_008566.3 88.2% 95.6% (many diffs)
5 mouse 17218 Mcm5 minichromosome maintenance ... XR_001778410.1 71.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2268
ORF length:
2202
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc gggattcgac gatcctggca ttttctacag cgacagcttc gggggcgacg
121cccaggccga cgaggggcag gcccgcaaat cgcagctgca gaggcgcttc aaggagttcc
181tgcggcagta ccgagtgggc accgaccgca cgggcttcac cttcaaatac agggatgaac
241tcaagcggca ttacaacctg ggggagtact ggattgaggt ggagatggag gatctggcca
301gctttgatga ggacctggcc gactacttgt acaagcagcc agccgagcac ctgcagctgc
361tggaggaagc tgccaaggag gtagctgatg aggtgacccg gccccggcct tctggggagg
421aggtgctcca ggacatccag gtcatgctca agtcggacgc cagcccttcc agcattcgta
481gcctgaagtc ggacatgatg tcacacctgg tgaagatccc tggcatcatc atcgcggcct
541ctgcggtccg tgccaaggcc acccgcatct ctatccagtg ccgcagctgc cgcaacaccc
601tcaccaacat tgccatgcgc cctggcctcg agggctatgc cctgcccagg aagtgcaaca
661cagatcaggc tgggcgcccc aaatgcccat tggacccgta cttcatcatg cccgacaaat
721gcaaatgcgt ggacttccag accctgaagc tgcaggagct gcctgatgca gtcccccacg
781gggagatgcc cagacacatg cagctctact gcgacaggta cctgtgtgac aaggtcgtcc
841ctgggaacag ggttaccatc atgggcatct actccatcaa gaagtttggc ctgaccacca
901gcaggggccg tgacagggtg ggcgtgggca tccgaagctc ctacatccgt gtcctgggca
961tccaggtgga cacagatggc tctggccgca gctttgctgg ggccgtgagc ccccaggagg
1021aggaggagtt ccgtcgcctg gctgccctcc caaatgtcta tgaggtcatc tccaagagca
1081tcgccccctc catctttggg ggcacagaca tgaagaaggc cattgcctgc ctgctctttg
1141ggggctcccg aaagaggctc cctgatggac ttactcgccg aggagacatc aacctgctga
1201tgctagggga ccctgggaca gccaagtccc agcttctgaa gtttgtggag aagtgttctc
1261ccattggggt atacacgtct gggaaaggca gcagcgcagc tggactgaca gcctcggtga
1321tgagggaccc ttcgtcccgg aatttcatca tggagggcgg agccatggtc ctggccgatg
1381gtggggtcgt ctgtattgac gagtttgaca agatgcgaga agatgaccgt gtggcaatcc
1441acgaagccat ggagcagcag accatctcta tcgccaaggc tgggatcacc accaccctga
1501actcccgctg ctccgtcctg gctgctgcca actcagtgtt cggccgctgg gatgagacga
1561agggggagga caacattgac ttcatgccca ccatcttgtc gcgcttcgac atgatcttca
1621tcgtcaagga tgagcacaat gaggagaggg atgtgatgct ggccaagcat gtcatcactc
1681tgcacgtgag cgcactgaca cagacacagg ctgtggaggg cgagattgac ctggccaagc
1741tgaagaagtt tattgcctac tgccgagtga aatgtggccc ccggctgtca gcagaggctg
1801cagagaaact gaagaaccgc tacatcatca tgcggagcgg ggcccgtcag cacgagaggg
1861acagtgaccg ccgctccagc atccccatca ctgtgcggca gctggaggcc attgtgcgca
1921tcgcggaagc cctcagcaag atgaagctgc agcccTTCGC CACAGAGGCA GATGTGGAGG
1981AGGCCCTGCG GCTCTTCCAA GTGTCCACGT TGGATGCTGC CTTGTCCGGT ACCCTGTCAG
2041GGGTGGAGGG CTTCACCAGC CAGGAGGACC AGGAGATGCT GAGCCGCATC GAGAAGCAGC
2101TCAAGCGCCG CTTTGCCATT GGCTCCCAGG TGTCTGAGCA CAGCATCATC AAGGACTTCA
2161CCAAGCAGAA ATACCCGGAG CACGCCATCC ACAAGGTGCT GCAGCTCATG CTGCGGCGCG
2221GCGAGATCCA GCATCGCATG CAGCGCAAGG TTCTCTACCG CCTCAAGTGC CCAACTTTCT
2281TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
2341CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
2401GTGGAAAGGA CGATTTTAAG ACAAAATGCA TTTTCATACG CGTTAAGTCg acaatcaacc
2461tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)