Construct: ORF TRCN0000466151

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000294.1_s317c1
Derived from:
ccsbBroadEn_04581
DNA Barcode:
GATGTAGCGCAATTCGGCTTTTCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CHMP4C (92421)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466151
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92421 CHMP4C charged multivesicular body... NM_152284.4 100% 100%
2 mouse 66371 Chmp4c charged multivesicular body... NM_025519.2 82.7% 86.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
765
ORF length:
699
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttgtcatgag caagttgggc aagttcttta aagggggcgg ctcttctaag agccgagccg
121ctcccagtcc ccaggaggcc ctggtccgac ttcgggagac tgaggagatg ctgggcaaga
181aacaagagta cctggaaaat cgaatccaga gagaaatcgc cctggccaag aagcacggca
241cgcagaataa gcgagctgca ttacaggcac taaagagaaa gaagaggttc gagaaacagc
301tcactcagat tgatggcaca ctttctacca ttGAGTTCCA GAGAGAAGCC CTGGAGAACT
361CACACACCAA CACTGAGGTG TTGAGGAACA TGGGCTTTGC AGCAAAAGCG ATGAAATCTG
421TTCATGAAAA CATGGATCTG AACAAAATAG ATGATTTGAT GCAAGAGATC ACAGAGCAAC
481AGGATATCGC CCAAGAAATC TCAGAAGCAT TTTCTCAACG GGTTGGCTTT GGTGATGACT
541TTGATGAGGA TGAGTTGATG GCAGAACTTG AAGAATTGGA ACAGGAGGAA TTAAATAAGA
601AGATGACAAA TATCCGCCTT CCAAATGTGC CTTCCTCTTC TCTCCCAGCA CAGCCAAATA
661GAAAACCAGG CATGTCGTCC ACTGCACGTC GATCCCGAGC AGCATCTTCC CAGAGGGCAG
721AAGAAGAGGA TGATGATATC AAACAATTGG CAGCTTGGGC TACCTACCCA ACTTTCTTGT
781ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
841AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
901GAAAGGACGA GATGTAGCGC AATTCGGCTT TTCAACGCGT TAAGTCgaca atcaacctct
961ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)