Construct: ORF TRCN0000466460

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001304.1_s317c1
Derived from:
ccsbBroadEn_09679
DNA Barcode:
CAATTACAGAATAACGTAGCTAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL23 (151230)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466460
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 100526832 PHOSPHO2-KLHL23 PHOSPHO2-KLHL23 readthrough NM_001199290.3 99.9% 100% 1416C>T
2 human 151230 KLHL23 kelch like family member 23 NM_144711.6 99.9% 100% 1416C>T
3 mouse 277396 Klhl23 kelch-like 23 NM_177784.4 90.1% 97.1% (many diffs)
4 mouse 277396 Klhl23 kelch-like 23 XM_006499677.1 90.1% 97.1% (many diffs)
5 mouse 277396 Klhl23 kelch-like 23 XM_006499678.3 90.1% 97.1% (many diffs)
6 mouse 277396 Klhl23 kelch-like 23 XR_374475.1 39.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1740
ORF length:
1674
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc tctaaaagga caagaagatt atatttatct tttcaaggat tcaacacatc
121cagtggattt tctggatgca ttcagaacat tttacttgga tggattattt actgatatta
181ctcttcagtg tccttcaggc ataattttcc attgtcaccg agccgtttta gctgcttgca
241gcaattattt taaggcaatg ttcacagctg acatgaaaga aaaatttaaa aataaaataa
301aactctctgg catccaccat gatattctgg aaggccttgt aaattatgca tacacttccc
361aaattgaaat aactaaaaga aatgttcaaa gcctgcttga ggcagcggat ctgctacagt
421tcctttcagt aaagaaggct tgtgagcggt ttttggtaag gcacttggat attgataatt
481gtattggaat gcactccttt gcagaatttc atgtgtgtcc agaactagag aaggaatctc
541gaagaattct atgttcaaag tttaaggaag tgtggcaaca agaagaattt ctggaaatca
601gccttgaaaa gtttctcttt atcttgtcca gaaagaatct cagtgtttgg aaagaagaag
661ctatcataga gccagttatt aagtggactg ctcatgatgt agaaaatcga attgaatgcc
721tctataatct actgagctat atcaacattg atatagatcc agtgtactta aaaacagcct
781taggccttca aagaagctgc ctgctcaccg aaaataagat ccgctcccta atatacaatg
841ccttgaatcc catgcataaa gagatttccc agaggtccac agccacaatg tatataattg
901gaggctatta ctggcatcct ttatcagagg ttcacatatg ggatcctttg acaaatgttt
961ggattcaggg agcagaaata ccagattata ccagggagag ctatggtgtt acatgtttag
1021gacccaacat ttatgtaact gggggctaca ggacggataa catagaagct cttgacacag
1081tgtggatcta taacagtgaa agtgatgaat ggacagaagg tttgccaatg ctcaatgcca
1141ggtattacca ctgtgcagtc accttgggtg gctgtgtcta tgctttaggt ggttacagaa
1201aaggggctcc agcagaagag gctgagttct atgatccttt aaaagagaaa tggattccta
1261ttgcaaacat gattaaaggt gtgggaaatg ctactgcctg tgtcttacat gatgttatct
1321acgtcattgg tggccactgt ggctacagag gaagctgcac ctatgacaaa gttcagagct
1381acaattccga tatcaacgaa tggagcctca TCACCTCCAG TCCACATCCA GAATATGGAT
1441TGTGCTCAGT TCCGTTTGAA AATAAGCTCT ATCTAGTCGG TGGACAAACT ACAATCACAG
1501AATGCTATGA CCCTGAACAA AATGAATGGA GAGAGATAGC TCCCATGATG GAAAGGAGGA
1561TGGAGTGCGG TGCCGTCATC ATGAATGGAT GTATTTATGT CACTGGAGGA TACTCCTACT
1621CAAAGGGAAC GTATCTTCAG AGCATTGAGA AATATGATCC AGATCTTAAT AAGTGGGAAA
1681TAGTGGGTAA TCTTCCCAGT GCCATGCGGT CTCATGGGTG TGTTTGTGTG TATAATGTCT
1741ACCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1801GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1861TTTATATATC TTGTGGAAAG GACGACAATT ACAGAATAAC GTAGCTAACA CGCGTTAAGT
1921Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)